Query= MSMg01no351_f17.b1 MSMg01no351_f17.b1 CHROMAT_FILE:
MSMg01no351_f17.b1 PHD_FILE: MSMg01no351_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:35 2005
(462 letters)
>mm_chr13_37615685_37616546
Length = 862
Score = 812 bits (420), Expect = 0.0
Identities = 452/468 (96%), Gaps = 11/468 (2%)
Strand = Plus / Minus
Query: 5 gaattctctagattggtcatggatggatacagtgttaatttcatttggttttataattga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 gaattctctagattggtcatggatggatacagtgttaatttcatttggttttataattga 718
Query: 65 attcatctttggtatcacttctttattcttcaaggaagtcatgatttctctagttttgtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 attcatctttggtatcacttctttattcttcaaggaagtcatgatttctctagttttgtc 658
Query: 125 tctgagattccctgtgattttagtttccatccatccttatgcactttaacttactccttt 184
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 657 tctgagtttccctgtgattttagtttccatccatccttatgcactttaacttactctttt 598
Query: 185 tcatttaaagacccaaaagat---------ttattattattattatcattatttttatgg 235
||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 597 tcatttaaagacccaaaagatttattattattattattattattatcattatttttatgg 538
Query: 236 cgggttctttttgtttgtttaacttttaaatctaaaggtaaatttgaatcctcaaagaac 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 cgggttctttttgtttgtttaacttttaaatctaaaggtaaatttgaatcctcaaagaac 478
Query: 296 attactgcttcggcatttcatatctatcattaagacacactcatgggctggagagatggc 355
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 477 attactgcttcggcaattcatatctatcattaagacacactcatgggctggagggatggc 418
Query: 356 tcagtggttaagagtaccgactgctcttccagaggtcttgagttcaatttctgaaaccac 415
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tcagtagttaagagtaccgactgctcttccagaggtcttgagttcaatttctgaaaccac 358
Query: 416 atggtggctcacaaccatctgtaat-ggatccgattcccttttctggt 462
||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 357 atggtggctcacaaccatctgtaatagg-tccgattcccttttctggt 311
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_f17.g1 MSMg01no351_f17.g1 CHROMAT_FILE:
MSMg01no351_f17.g1 PHD_FILE: MSMg01no351_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:35 2005
(427 letters)
>mm_chr13_37418098_37418924
Length = 827
Score = 654 bits (338), Expect = 0.0
Identities = 394/428 (92%), Gaps = 26/428 (6%)
Strand = Plus / Plus
Query: 1 tctcccttttcagcttcgggcagcagtgaggaggacgaccaaggggtagaggggaggatt 60
||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tctcccttttcagcttcgggcagcagtgaggaggacga---------------------- 262
Query: 61 gtccatactgggctggaggagtgaggacgtgagcggtctcctccccggctgccctaggca 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 263 --ccatactgggctggaggagtgaggacatgagcggtctcctccccggctgccctaggca 320
Query: 121 tgcacagctcaggggaaaattctcttccctggcctcgctgatt-ccctactctcagagag 179
|||||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||
Sbjct: 321 tgcacagctcaggggaaacttctcttccctggcctcgctgatttccc-agtctcagagag 379
Query: 180 gatgcatctgcctttggaaaatgagtgagcgtgggattggggcgtctgggtggaagaaac 239
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 380 gatgcatctgcctttggaaaatgagtgagcatgggattggggcatctgggtggaagaaac 439
Query: 240 agtgttggcggggtctagggaggaagaaaggggaaatctgggtgtgttccttgttactaa 299
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 440 agtgttggcggggtctagggaggaagtaaggggaaatctgggtgtgttccttgttactaa 499
Query: 300 acactaggaaaagcttgacacactgagacaaattctcttccattctcatctcctctaatc 359
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 500 acactaggaaaagcttgacacactgagacaaattctcttctattctcatctcctctaatc 559
Query: 360 ccaaattgaaacgtttgttaaaactgaatttaattttttaagttctttcatcttgatgga 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 560 ccaaattgaaacgtttgttaaaactgaatttaattttttaagttctttcatcttgacgga 619
Query: 420 gaaaaaca 427
||||||||
Sbjct: 620 gaaaaaca 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
