TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTGAGTTACCTCACTGAGATGGACTTTCAGGAGCTAAGTAAGGACA
AGTGCTGGCTGAGTCTCACTCCGCCCTGACCTCACCATGAACCCTGAAAC
AGAGCTACAGAGGAGAGTCTATGATGTACCACTCCATGACATAGCAGGTG
TTGGCAGATGTCATCAGGGTGGTACATGCAGTAGTGCACACTAGAAAGTA
CCTCGGGAGATTAACTGACAGTTGGAACAACCAGTAGAGAAAATAAAGAT
TTAGGGTGAACAGAGAGCCTGGGCAATGTCATAAAATAAAAGCCAAGAAT
TATCCCACATCGTACTTCAACCTCCCCACTAGAAAAAAAAGTGGTCTTAC
TAGCTGTGAGCATAATTAGGCCCTCCAGTAGAACCTTAAACCCACGTAAA
CCCTGGGCCTGTGGCTTCCTTAATGAGGTTTGCCTTTAAGTAGGGCTGCC
AAGCCATCCATTAGAAAAGCCTCCAAGTCTTAGCCTGTACTGGGGTCAGA
GCCTCCAGTGGAGCACATCTCACACCCCATGCCTCCACTGAAGAGTTTCC
CACTCCCCCCAAATCTCCAGGCCTGTAATCTGTATCCATGTCAACATTTT
GTTTCATCTCATTAACAGTTACCTCTTGATTCACATCTCTCTCCACCCGC
TCAATGATATCTTGTTAGGGGGGAAAGACAACATTTCTTTTCTACTTTCC
CCCCCCTCTTCCAGGAAATT

CATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCATGTATACCGGCCTTTGCTGTGTAAAC
CTTGCTCCTCAATTTAAAGCTATTGATTAAATAAAGGGGCTACTGGTAGG
GACCACAGGAAAAACAGGAGGAAGAAGAAGGAGAGAGGAGAAGGAGGAAG
GAGGAGAAAGTACAGGAGTTCTCCATTTGACATGATGGAACAGGACCACA
TGGCTGAATGAAATGCTCCCTGAGAACGGACTGATGGAACAGAAATAACC
CGGGTGAGACTCAAAACAGCAAGGACTTGGAGAGTGCAGCTGGGGAGTTA
ACAATCGAGCATATAGAAAAATAGATTAGGTAATTCACCCAGAAACTGTG
CTAAAGCTGATTTTTAAAATCCATAGGACTTGTATTTCCCTGATGACTAA
GGATGTTGAACATTTCTTTAAGTGCTTCTCTGTCATTCCAGACTCCTCAG
TTGAGAATTCTCTGTTTAGCTCTGCACCCATTTTTTGAGTTATTTGGTTT
TCTGGAGTCTAACCTGAGTTCTTTGTATATTTTGGATATTAGCCCCTTTC
ATCTTTTCGATGTAGGGATAATAAAAAGCTTTTTCCCCTCTGTTGGCTGG
GCTTTTTGTCCCTTGAAAAGGCCCCTTTGCCTTACCAAACCTTTTCTCTT
TTTTCGAGGTCCTTTTTCGCCATTGTTGGTCCCTCTTTCCCTTCGGCGAT
TTTAGCTTCTGTCCCTGAATCTCTCCTCTCCGTCG

Query= MSMg01no352_a19.b1 MSMg01no352_a19.b1 CHROMAT_FILE:
MSMg01no352_a19.b1 PHD_FILE: MSMg01no352_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:27 2005
         (578 letters)



>mm_chr13_9907455_9908433
          Length = 979

 Score = 1019 bits (527), Expect = 0.0
 Identities = 564/581 (97%), Gaps = 12/581 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctgagttacc----tcactgagatggactttcaggagctaagtaaggacaagtg 60
           |||||||||||   ||    ||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 gaattcctgag---ccaatatcactgagatggactttcaggagctaagtaaggacaagtg 740

                                                                       
Query: 61  ctggctgagtctcactccgccctgacctcaccatgaaccctgaaacagagctacagagga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ctggctgagtctcactccgccctgacctcaccatgaaccctgaaacagagctacagagga 680

                                                                       
Query: 121 gagtctatgatgtaccactccatgacatagcaggtgttggcagatgtcatcagggtggta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gagtctatgatgtaccactccatgacatagcaggtgttggcagatgtcatcagggtggta 620

                                                                       
Query: 181 catgcagtagtgcacactagaaagtacctcgggagattaactgacagttggaacaaccag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 619 catgcagtagtgcacactagaaagtacctcgggagattaactgacagttgggacaaccag 560

                                                                       
Query: 241 tagagaaaataaagatttagggtgaacagagagcctgggcaatgtca--taaaataaaag 298
           ||||||||||||||||||||||||||||||||||| |||||||||||  ||||  |||||
Sbjct: 559 tagagaaaataaagatttagggtgaacagagagccagggcaatgtcatttaaa--aaaag 502

                                                                       
Query: 299 ccaagaattatcccacatcgtacttcaacctccccactagaaaaaaaagtggtcttacta 358
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 ccaagaattatcccacatcgtacttcaacctccccactagaaaaaaaaggggtcttacta 442

                                                                       
Query: 359 gctgt-gagcataattaggccctccagtagaaccttaaacccacgtaaaccctgggcctg 417
           ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 gctgttgagcataattaggccctccagtagaaccttaaacccacttaaaccctgggcctg 382

                                                                       
Query: 418 tggcttccttaatgaggtttgcctttaagtagggctgccaagccatccattagaaaagcc 477
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 tggcttccttaatgaggtttgcctttaagtagggctgccaagccatccactagaaaagcc 322

                                                                       
Query: 478 tccaagtcttagcctgtactggggtcagagcctccagtggagcacatctcacaccccatg 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccaagtcttagcctgtactggggtcagagcctccagtggagcacatctcacaccccatg 262

                                                    
Query: 538 cctccactgaagagtttcccactccccccaaatctccaggc 578
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctccactgaagagtttcccactccccccaaatctccaggc 221


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 979
Length adjustment: 10
Effective length of query: 568
Effective length of database: 969
Effective search space:   550392
Effective search space used:   550392
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)