NNCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTGATCCTATGATTTTGCTTCTGTGGAGCCAGTGTCAGTTGC
ACACTAGAGAAATCCAATAGAGAAGTGCCTGGCAGTGAGTCAGAAGGAAT
GAGTGGACTAAATCTAAAGTGTGATAATCCAAGAGAGGGAAAAGGCAAGG
AGCAGCAACAACATATTAGCTTCTCACAGAATGCTGGAAACCATACTTGC
ATCACATTTAAATCATATTTAAAGGATTCTGGTGCAGAAGTTTATTCACA
GGGAATCCTGAATTAGAAAAGAAACAGGTTCTGTGTTCCTGAGGACTGTA
TGTTCTCTGTTCAAGGCCAGTTAGTGTCAAGAAAGAGGGAGTAGACATGA
ATTCATTACTTACGTGGGAACCCAGAGAATGCCTCTTTCTGCAATAAATA
TGCAGTCATGATGACACTTTACTCATTAATTTCTGCCACTGCCCTCAACC
TGGCTCAGCTAAATTCAGCATCAGAATCCTATTCCAAATTTGTAAGTATC
TCACTTATTTCTATTTTCTCTTATTTCAAAAGCCTTCATGCTAATGGTGT
CACTCAAACTTACAAGAGAAAGCATTAAGGACCAATTGTCAAGTTACACA
TCCACAAGTGTATTATGATCTTTCATTCAGTATTATAATACAAGAAAGCC
TCTGATAGTAACAAGTGAATGGCGAAGCTTGCAAACAATGAT

NNCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCTCTGAAGAAACAGACTG
GGAGGAAGAAGCAGCTCATTATGAGAAAAAAGGGTACCAGCCAGGTAAAG
TGCTAGCTAATCAATTAAGGAAGCCAAAAGCGGCTGGCGAAGGCCAGTTT
GCTGATTGGCCTCAGGGCAGTCGGCTTCAAGGTCCGCCCTATGCGGAGTC
CCCGCCCTGCGTAGTGCGTCAGCCCTGCGCAGAGAGGCAGTGCGCAGAGA
GGCAGTGCGCAGACTCATTCATTCCCAGAGAGGAACAAAGGAAAATACAA
CAGGCATTTCCGGTCTTTGAAGGAGCCAAGGGTGGGCGTGTCCACGCTCC
GGTAGAATACTTACAAATTACCTCACCTTGGAATACTCCAATTTTTGTAA
TTAAGAAAAAGTCAGGAAAGTGGAGACTGCTCCATGACCTCAGAGCCATT
AATGAGCAAATGAACTTATTTGGCCCAGTACAGAGGGGTCTCCCTGTACT
TTCCGCCTTACCACGTGGCTGGAATTTAATTATTATAGATATTAAAGATT
GTTTCTTTTCTATACCTTTGTGTCCAAGGGATAGGCCCAGATTTGCCTTT
ACCATCCCCTCTATTATCACATGGAACCTGATAAGAGTATCAATGGAAGG
TCTTACACAGGGAATGTCCAATAGTCCTAAATGTGCCACTTTATGTACAA
A

Query= MSMg01no354_i08.b1 MSMg01no354_i08.b1 CHROMAT_FILE:
MSMg01no354_i08.b1 PHD_FILE: MSMg01no354_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:41 2005
         (664 letters)



>mm_chr13_27755779_27756842
          Length = 1064

 Score = 1249 bits (646), Expect = 0.0
 Identities = 655/658 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgatcctatgattttgcttctgtggagccagtgtcagttgcacactagagaaat 64
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 gaattctgatcccatgattttgcttctgtggagccagtgtcagttgcacactagagaaat 803

                                                                       
Query: 65  ccaatagagaagtgcctggcagtgagtcagaaggaatgagtggactaaatctaaagtgtg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ccaatagagaagtgcctggcagtgagtcagaaggaatgagtggactaaatctaaagtgtg 743

                                                                       
Query: 125 ataatccaagagagggaaaaggcaaggagcagcaacaacatattagcttctcacagaatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ataatccaagagagggaaaaggcaaggagcagcaacaacatattagcttctcacagaatg 683

                                                                       
Query: 185 ctggaaaccatacttgcatcacatttaaatcatatttaaaggattctggtgcagaagttt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctggaaaccatacttgcatcacatttaaatcatatttaaaggattctggtgcagaagttt 623

                                                                       
Query: 245 attcacagggaatcctgaattagaaaagaaacaggttctgtgttcctgaggactgtatgt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 attcacagggaatcctgaattagaaaagaaacaggttctgtgttcctgaggactgtatgt 563

                                                                       
Query: 305 tctctgttcaaggccagttagtgtcaagaaagagggagtagacatgaattcattacttac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tctctgttcaaggccagttagtgtcaagaaagagggagtagacatgaattcattacttac 503

                                                                       
Query: 365 gtgggaacccagagaatgcctctttctgcaataaatatgcagtcatgatgacactttact 424
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 502 gtgggaacccagagaatgcctctttctgcaataaatatgcagtcatgatggcactttact 443

                                                                       
Query: 425 cattaatttctgccactgccctcaacctggctcagctaaattcagcatcagaatcctatt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cattaatttctgccactgccctcaacctggctcagctaaattcagcatcagaatcctatt 383

                                                                       
Query: 485 ccaaatttgtaagtatctcacttatttctattttctcttatttcaaaagccttcatgcta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ccaaatttgtaagtatctcacttatttctattttctcttatttcaaaagccttcatgcta 323

                                                                       
Query: 545 atggtgtcactcaaacttacaagagaaagcattaaggaccaattgtcaagttacacatcc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atggtgtcactcaaacttacaagagaaagcattaaggaccaattgtcaagttacacatcc 263

                                                                     
Query: 605 acaagtgtattatgatctttcattcagtattataatacaagaaagcctctgatagtaa 662
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 acaagtgtattttgatctttcattcagtattataatacaagaaagcctctgatagtaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)