Query= MSMg01no356_d12.b1 MSMg01no356_d12.b1 CHROMAT_FILE:
MSMg01no356_d12.b1 PHD_FILE: MSMg01no356_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:53 2005
(244 letters)
>mm_chr13_8542528_8543171
Length = 644
Score = 420 bits (217), Expect = e-122
Identities = 235/241 (97%)
Strand = Plus / Minus
Query: 4 ggaattccagtcaatttccaaggtcaccaaaccctgttgcttggggtctctgcctctcag 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 444 ggaattccagtcaatttccaaggtcaccaaaccctgttgcttggggtctctgcctctccg 385
Query: 64 cttcctgtgaagttgctaacaaatgctcaggcagaataaggaggcatcatcacgatgctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cttcctgtgaagttgctaacaaatgctcaggcagaataaggaggcatcatcacgatgctg 325
Query: 124 tatgagatccttgtgctatgctgacaatcgtatcctaatgctcatgtgaatattcacttt 183
||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 324 catgagatccttgtcctatgctgacaatcgtatcctaatgctcgtgtgaatattcacttt 265
Query: 184 cctatattaaaaggtattactttattatttggagggtgtgttaggtgaattggggtgtgt 243
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctatattaaaaggtattgttttattatttggagggtgtgttaggtgaattggggtgtgt 205
Query: 244 g 244
|
Sbjct: 204 g 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no356_d12.g1 MSMg01no356_d12.g1 CHROMAT_FILE:
MSMg01no356_d12.g1 PHD_FILE: MSMg01no356_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:53 2005
(441 letters)
>mm_chr13_8334698_8335538
Length = 841
Score = 837 bits (433), Expect = 0.0
Identities = 439/441 (99%)
Strand = Plus / Plus
Query: 1 tccattctttgacatagtcatcagtctttgtaccccaagttttgtcacagacataccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccattctttgacatagtcatcagtctttgtaccccaagttttgtcacagacataccaaa 260
Query: 61 aaaggtccaaaatgataaaaaccatgtcccctttcattgagatcagtttaacctcaggtt 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 aaaggtccaaaatgataaaaaccatgtcccctttcgttgagatcagtttaacctcaggtt 320
Query: 121 taattggtggaataaatacctgttggtgactagtctcagcctgtttcacaggtcctttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taattggtggaataaatacctgttggtgactagtctcagcctgtttcacaggtcctttcc 380
Query: 181 cttaaaggaagcaaagaccagctttttaaacctccggttcaaaaaagaaaaaaagaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttaaaggaagcaaagaccagctttttaaacctccggttcaaaaaagaaaaaaagaaaaa 440
Query: 241 gaaaaaaaaaagaaagaaagaaacctccgggtccttctggaggtacagttcagctccaca 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaaaaaaaaaaaagaaagaaacctccgggtccttctggaggtacagttcagctccaca 500
Query: 301 ggcacacaacccacactcgatgctgctctgatgatcctgaattgtaagaaaaaaattcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggcacacaacccacactcgatgctgctctgatgatcctgaattgtaagaaaaaaattcat 560
Query: 361 tcaagaaagtactatctcttaccttaatactttagtgctagaaactgaatccagggacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaagaaagtactatctcttaccttaatactttagtgctagaaactgaatccagggacaa 620
Query: 421 acacacacacacacacacaca 441
|||||||||||||||||||||
Sbjct: 621 acacacacacacacacacaca 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
