XXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGAATTCTTGT
GTGGTTCCCAGCATCCATATCAAATGTCTCCCATATAGTCCACATGCACC
CCAACATTTGTACCCGTGTGCACTAAATATTGAAATACAATGTACGAATG
ACAGGGCTTAGCTCCTATTTAGTAGGAGCTTAGCAAGCCAAATCCTTGAC
AAACTGCAGTGTTTTCTGACAGGTCAGCAGCATATTTCTGGTCACTGTTC
TTCCTCATCCTGTGGGCTGGGGTCCACCTGCCCACTCTGTCACACACAGC
TAAAGCTTTTCTCGCTGGTCATCCGTTCGTTTCTACTATCCAAAAACCAT
TCTTTCCGTTCAGACCTTATTTTCCATTCAAGTACCAGTCCTGTTTGTAA
ACTTCCACTCCACAGAGTCCCTTGCTCGTGAATTCCCTTCCTGATGCAGA
ATCGCAAGCTTTTCTATGTAAATTTGTGCAATGCATATACACATATGTGA
GTCAATGCCAAGGTCAGCCTAGTCTAACGTTGTCTTGTTGTGTTTCTTTT
GGCATTTTTTTCTTGGGCCATGACCGATCAGAAAGCAAGGGTCATAAGCT
AGGTACTTAGACTCACTCATTTTGTCTTGGCTTGGAAACCGCCTGCTGTT
GCCTAAATGCTGCATCCCTTTCGTCAGCCCAAGATTTCCCACCATTCCCC
CCTTATTTAAAAACTTTTTGGGCGCCGGTGAAAAACCTTTTTTTGTCTCC
CTTGCCGAAAGGCGCTTTGGAAAAG

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCACACATTTGCATTGGCAGCAATCAGTG
AGAGTTATATGGTTTTTTGGCTTTGTGGGGAGTGGGGCAAGGGTTCTTGG
GTTGGGTAATTCCCCCCCCNCGNTCCCTGCCCCCCCTGTGCCCTTGTCCC
GTCTTTTCGCCCGCCCCTTCGCTTCTTGAGTCTCTCTTCTGCCTTCTCCT
TCCTTTTTTTTCCCCTGCCCCCACCACCCCCCCGTCCCCCCATCGCCCGC
CCCCTCCCCACCCCCCCCCCCCTTTCCTCGTTTCTCCCACCCTCGGACCC
CCCCCCAGACTTTTTTCCCCCCCCCCCCCCCCCCTTGTGTCGTTTTTCCC
CTTCCTCTCCCCTTTCCCCCCCCCCCCCCTTTTCTTTCTCCCCCCTTCCC
CCCCCCTTTTCTCTCCTTCCCTTCCCCTCCTCCCTTACTTTCCTTTTCCC
CTCCTCTCCCTCCTTTCCTTCCCCCCTTTCCTCTCCCTTTCCCCTCCCCC
CTCTCTCTATCCCCCCCCTTCCCCTCCCCATCCCCCCCCCTTCTCCTCCC
TTTTTCATTTCCCCCCTCCCCCCTTCCCTTCCCCCCCCCCCCCCCTTTCC
CTCCCCTCTCCCCCCCTTCCTTCTCCCCTCCTTCTTCCCCCTCTCCTTCT
TCTTTTCTTTTTTTCCCCCCTCTCCCCCCCTCCTTTCCTTTTCCTCTTCT
TCCCCCTTTCCTTTCCTCCCATCCCCCTTCTTTCCCCCACACCTCTCCTC
TTTCTCCCCCTCCTCTCCCCCCTTCTCTG

Query= MSMg01no356_f24.b1 MSMg01no356_f24.b1 CHROMAT_FILE:
MSMg01no356_f24.b1 PHD_FILE: MSMg01no356_f24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:05 2005
         (470 letters)



>mm_chr13_115764969_115765840
          Length = 872

 Score =  803 bits (415), Expect = 0.0
 Identities = 455/469 (97%), Gaps = 2/469 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   gaattcttgtgtggttcccagcatccatatcaaatgtctcccatatagtccacatgcacc 63
           ||||||||||||||  ||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 672 gaattcttgtgtggagcccagcatccatatcaaatatctcccatataatccacatgcacc 613

                                                                       
Query: 64  ccaacattt--gtacccgtgtgcactaaatattgaaatacaatgtacgaatgacagggct 121
           |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ccaacatttgagtacccgtgtgcactaaatattgaaatacaatgtacgaatgacagggct 553

                                                                       
Query: 122 tagctcctatttagtaggagcttagcaagccaaatccttgacaaactgcagtgttttctg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tagctcctatttagtaggagcttagcaagccaaatccttgacaaactgcagtgttttctg 493

                                                                       
Query: 182 acaggtcagcagcatatttctggtcactgttcttcctcatcctgtgggctggggtccacc 241
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 492 acaggtcagcagcatatttctggtcactgttcttcctcatcgtgtgggctggggtccacc 433

                                                                       
Query: 242 tgcccactctgtcacacacagctaaagcttttctcgctggtcatccgttcgtttctacta 301
           ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 432 tgcccactctgtcacacacagctaaagcttttctcgctggtcagccgttagtttctacta 373

                                                                       
Query: 302 tccaaaaaccattctttccgttcagaccttattttccattcaagtaccagtcctgtttgt 361
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tccaaaaaccattctttccattcagaccttattttccattcaagtaccagtcctgtttgt 313

                                                                       
Query: 362 aaacttccactccacagagtcccttgctcgtgaattcccttcctgatgcagaatcgcaag 421
           |||||||||||||||| |||||||||||| |||||||| ||||||||||||||| |||||
Sbjct: 312 aaacttccactccacaaagtcccttgctcatgaattcctttcctgatgcagaattgcaag 253

                                                            
Query: 422 cttttctatgtaaatttgtgcaatgcatatacacatatgtgagtcaatg 470
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cttttctatgtaaatttgtgcaatgcatatacacatatgtgagtcaatg 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 872
Length adjustment: 10
Effective length of query: 460
Effective length of database: 862
Effective search space:   396520
Effective search space used:   396520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)