Query= MSMg01no356_o23.b1 MSMg01no356_o23.b1 CHROMAT_FILE:
MSMg01no356_o23.b1 PHD_FILE: MSMg01no356_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:48 2005
(526 letters)
>mm_chr13_106424862_106425786
Length = 925
Score = 994 bits (514), Expect = 0.0
Identities = 523/526 (99%), Gaps = 1/526 (0%)
Strand = Plus / Plus
Query: 1 catgtctgcctgcagactgccacgcttcctgtcatgatgataatgaactgaaccttggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtctgcctgcagactgccacgcttcctgtcatgatgataatgaactgaaccttggaa 260
Query: 61 actgtaagccagcctcaaatacagagattcttttataaaggttgctttgatcagagtgct 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 actgtaagccagcctcaaatacagagattcctttataaaggttgctttgatcagagtgct 320
Query: 121 tcttcacagaaataaagctctcaagggaccataattccttgaactttttccttcctgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttcacagaaataaagctctcaagggaccataattccttgaactttttccttcctgttt 380
Query: 181 tgtatattcacatgcaactcaattttctttacttcacttatctttatcataggcaacagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtatattcacatgcaactcaattttctttacttcacttatctttatcataggcaacagt 440
Query: 241 tgacatccatgtttctttatcttttttaaattctttaatcttttattttttaagcctggc 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgacatccatgtttcttta-cttttttaaattctttaatcttttattttttaagcctggc 499
Query: 301 ctttatctctctcctggttcactgccccccatccctggcaactctccatcccatactttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctttatctctctcctggttcactgccccccatccctggcaactctccatcccatactttc 559
Query: 361 tcctctccctcctcaccccaccgcagtctccaagagggtgtttccactcccactcctagc 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcccctccctcctcaccccaccgcagtctccaagagggtgtttccactcccactcctagc 619
Query: 421 ctgcccccgcccccctccacctcccttcttcctagggcttcaattctctcaagggttagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctgcccccgcccccctccacctcccttcttcctagggcttcaattctctcaagggttagg 679
Query: 481 tgcatcttctctcactgaagtcagaccaggcagtcttcttcagtat 526
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgcatcttctctcactgaagtcagaccaggcagtcttcttcagtat 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 925
Length adjustment: 10
Effective length of query: 516
Effective length of database: 915
Effective search space: 472140
Effective search space used: 472140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_o23.g1 MSMg01no356_o23.g1 CHROMAT_FILE:
MSMg01no356_o23.g1 PHD_FILE: MSMg01no356_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:48 2005
(427 letters)
>mm_chr13_106627124_106627950
Length = 827
Score = 795 bits (411), Expect = 0.0
Identities = 423/427 (99%)
Strand = Plus / Minus
Query: 1 atgcaccaaggttattttaggaacataaccagcaaacaggtatcatatggatatatgcat 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 627 atgcaccaaggttattttaggaacataaccagtaaacaggtatcatatggatatatgcat 568
Query: 61 ttttaacttctgaagcttagaacacaaaccaatgtatgattcagtgattagtaatctaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttttaacttctgaagcttagaacacaaaccaatgtatgattcagtgattagtaatctaaa 508
Query: 121 accactgacccaagtttgcttggaccatggccacataggctggaaaattactgtgagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 accactgacccaagtttgcttggaccatggccacataggctggaaaattactgtgagcaa 448
Query: 181 aataaaatcattcgagtaattcatgctcagaacagtgctgtaatggggaagaaaaacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aataaaatcattcgagtaattcatgctcagaacagtgctgtaatggggaagaaaaacaca 388
Query: 241 gaagttaacataagatatatgtatccttttctgaatgtaactctcactctatcattacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gaagttaacataagatatatgtatccttttctgaatgtaactctcactctatcattacac 328
Query: 301 acttttcatttccttagaaaaagtcccttataaataaggaaaagcaggacttaatgacat 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 actttacatttccttagaaaaagtcccttataaataaggaaaagcaggacttaatgacat 268
Query: 361 acacaaaggatattactaacatgggcccatcttttaagagctctcttgagatatttagtt 420
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 267 acacaaaggttattactaacatgggcccatcttttaagaactctcttgagatatttagtt 208
Query: 421 ttcttaa 427
|||||||
Sbjct: 207 ttcttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
