Query= MSMg01no357_l24.b1 MSMg01no357_l24.b1 CHROMAT_FILE:
MSMg01no357_l24.b1 PHD_FILE: MSMg01no357_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:50 2005
(412 letters)
>mm_chr13_56828593_56829404
Length = 812
Score = 774 bits (400), Expect = 0.0
Identities = 406/408 (99%)
Strand = Plus / Plus
Query: 5 gaattcaatccacaacacagccttctggttcagttcaggaacctgagccacaatgaaccg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatccacaacacagccttctggttcagttcaggaacctgagccacaatgaaccg 264
Query: 65 cacatgccacaaaacgccacgtttcccgattctttccaccagcccaacaacgctcctttc 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 265 cacatgccacaaaacgccacgtttcccgattctttccaccaacccaacaacgctcctttc 324
Query: 125 cccttatctcctaacagcccctatcctccttcccctgctagcagcacatatcccaactcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cccttatctcctaacagcccctatcctccttcccctgctagcagcacatatcccaactcc 384
Query: 185 ccagcaagctctggacctggaagtccatttcaactcccaggtaagactttactgatagaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccagcaagctctggacctggaagtccatttcaactcccaggtaagactttactgatagaa 444
Query: 245 aaaatgatctctaaaactaggcacttgttttaagtgctggtcttctgagtgaactattat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaaatgatctctaaaactaggcacttgttttaagtgctggtcttctgagtgaactattat 504
Query: 305 ataagatcttgctgttgatgacatattcttgaagaatttatttttcaagttcttttatgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ataagatcttgctgttgatgacatattcttgaagaatttatttttcaagttcttttatgt 564
Query: 365 ttaaaaatctggaaattggggaattaagtctaagtttttaatttgctg 412
|||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 565 ttaaaaatctggaaattggggaattaagtctacgtttttaatttgctg 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_l24.g1 MSMg01no357_l24.g1 CHROMAT_FILE:
MSMg01no357_l24.g1 PHD_FILE: MSMg01no357_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:50 2005
(392 letters)
>mm_chr13_56992334_56993124
Length = 791
Score = 735 bits (380), Expect = 0.0
Identities = 389/392 (99%), Gaps = 1/392 (0%)
Strand = Plus / Minus
Query: 1 tacagtgaggcttaaggtctacttcagcgtttgaatcctttccgggtctgctgtgtagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tacagtgaggcttaaggtctacttcagcgtttgaatcctttccgggtctgctgtgtagac 532
Query: 61 ctcctgggacatgtccccactgaatgacacagccccattttatagacttccagccacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ctcctgggacatgtccccactgaatgacacagccccattttatagacttccagccacaca 472
Query: 121 tgaactgaagcctatacgatttcattttaattccgagtttggctagaaaaggaggagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tgaactgaagcctatacgatttcattttaattccgagtttggctagaaaaggaggagagc 412
Query: 181 tggtcatttttgagcatccaaatgaatctcagagctgagagtttaaaggctctgaagact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tggtcatttttgagcatccaaatgaatctcagagctgagagtttaaaggctctgaagact 352
Query: 241 ggcatgtttacttcatcttccatctgccttcaaggtcactcagaaaaatgtacagccagt 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggcatgtttgcttcatcttccatctgccttcaaggtcactcagaaaaatgtacagccagt 292
Query: 301 gaggacagttcccctctgagaagtcacagccacgaagtcccacacgtgtgcgcatgcatg 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 291 gaggacagttcccctctgagaagtcacagccacgcagtcccacacgtgtgcgcatgcatg 232
Query: 361 ctccgcccccctacacagtataattattacag 392
||||| ||||||||||||||||||||||||||
Sbjct: 231 ctccg-ccccctacacagtataattattacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 791
Length adjustment: 9
Effective length of query: 383
Effective length of database: 782
Effective search space: 299506
Effective search space used: 299506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
