Query= MSMg01no358_i22.b1 MSMg01no358_i22.b1 CHROMAT_FILE:
MSMg01no358_i22.b1 PHD_FILE: MSMg01no358_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:51 2005
(439 letters)
>mm_chr13_7802031_7802869
Length = 839
Score = 789 bits (408), Expect = 0.0
Identities = 428/436 (98%), Gaps = 3/436 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaggacaagaattcaaacaggtcaggaaattataggcaggagatactccagagg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattcaggacaagaattcaaacaggtcaggaaattataggcaggagatactccagagg 266
Query: 64 ccatgaagggttgctacttactggatgactcttcatagttagctcaactggttttttttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ccatgaagggttgctacttactggatgactcttcatagttagctcaactggttttttttt 326
Query: 124 ttaatagaacgcagaactaccagcccagggttggtacaaccaacaatgctcttccccccc 183
||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 327 ---atagaacccagaactaccagcccagggttggtacaaccaacaatgctcttgcccccc 383
Query: 184 cccccggccatcctaattaagaaataaataccttacaggctcctctaaagccttatatta 243
||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 384 cccccggccatcctaattaagaaataaataccttacaggctcccctaaagccccatatta 443
Query: 244 tgaaagcattttcttaactgaggttccctcctctcagatgactttagcttgtgccaagtt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgaaagcattttcttaactgaggttccctcctctcagatgactttagcttgtgccaagtt 503
Query: 304 gacatcaaaccatctatcacaggttgtttccctcctactgagatgttgaaaacattgcta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gacatcaaaccatctatcacaggttgtttccctcctactgagatgttgaaaacattgcta 563
Query: 364 tatgctagatagtttcttatttatcaggtttactatagataaatattttcttacagttta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tatgctagatagtttcttatttatcaggtttactatagataaatattttcttacagttta 623
Query: 424 tgaactgcattttcac 439
||||||||||||||||
Sbjct: 624 tgaactgcattttcac 639
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_i22.g1 MSMg01no358_i22.g1 CHROMAT_FILE:
MSMg01no358_i22.g1 PHD_FILE: MSMg01no358_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:51 2005
(461 letters)
>mm_chr13_7943746_7944606
Length = 861
Score = 845 bits (437), Expect = 0.0
Identities = 455/461 (98%)
Strand = Plus / Minus
Query: 1 agtggggaattggaatttaagaagtttgatggccaacaataacttttatgagaatgcata 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 agtggggaattggaaattaagaagtttgatggccaacaataacttttatgagaatgcata 457
Query: 61 ctctgatgtgaaaatcttagttagacttgaggttgaaaaatcaagcatacataaaatctg 120
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 456 ccctgatgtgaaaatcttagttagacttgaggttgaaaaatcaaccatacataaaatctg 397
Query: 121 agaggatacagaaacactatttttttcaaggtcatgagaagaaacaaaactagtaattac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 396 agaggatacagaaacactatttttttcaaggtcatgagaagaaacaaaactagtaaatac 337
Query: 181 agctactcaggaggctaatgcagggtgagacattgtctcaaaaacagagcaaaaataccc 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 agctattcaggaggctaatgcagggtgagacattgtctcaaaaacagagcaaaaataccc 277
Query: 241 aaagccaatcaacagcagtaaaacccaaagtagatagagagcagtaagagaatcctttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aaagccaatcaacagcagtaaaacccaaagtagatagagagcagtaagagaatcctttgc 217
Query: 301 tagcttgcagaacacctatggtggtttaatctgaattgtcaacttgatgcaatctaaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tagcttgcagaacacctatggtggtttaatctgaattgtcaacttgatgcaatctaaagt 157
Query: 361 ctcccaagcaatctgcctctgggcatctctgtgaggtattacctggtttgggttaattaa 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ctcccgagcaatctgcctctgggcatctctgtgaggtattacctggtttgggttaattaa 97
Query: 421 aagggagacatgcccatcatgagtgataccctccacttagt 461
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 aagggagacatgcccatcatgagtgataccctccacttagt 56
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
