Query= MSMg01no359_b23.b1 MSMg01no359_b23.b1 CHROMAT_FILE:
MSMg01no359_b23.b1 PHD_FILE: MSMg01no359_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:33 2005
(295 letters)
>mm_chr13_85935748_85936446
Length = 699
Score = 551 bits (285), Expect = e-161
Identities = 294/299 (98%), Gaps = 4/299 (1%)
Strand = Plus / Minus
Query: 1 aacaggaggtcaattctcatggaggcttttgat----aagaagccatcatacttgctgaa 56
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 499 aacaggaggtcaattctcatggaggcttttgataagaaagaagccatcatacttgctgaa 440
Query: 57 ttttaaagaacaattcctaagctattaataacacctgcaccctttattttcttgtaattt 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttttaaagaacaattcctaagctattaataacacctgcaccctttattttcttgtaattt 380
Query: 117 cccatcacgattaaaacacataacatgcggaatactggaagtggaatggaccttattgtt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cccatcacgattaaaacacataacatgcggaatactggaagtggaatggaccttattgtt 320
Query: 177 atttacactgaaaatgaaatgaatccatgatgcaaatacagatgttattatacaattttc 236
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 319 atttacactgaaaatgaaatgaatctatgatgcaaatacagatgttattatacaattttc 260
Query: 237 aagtatcatatattctctaatgcacaatcaagcattgtaaacatgaacatcacatccca 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aagtatcatatattctctaatgcacaatcaagcattgtaaacatgaacatcacatccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 699
Length adjustment: 9
Effective length of query: 286
Effective length of database: 690
Effective search space: 197340
Effective search space used: 197340
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no359_b23.g1 MSMg01no359_b23.g1 CHROMAT_FILE:
MSMg01no359_b23.g1 PHD_FILE: MSMg01no359_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:33 2005
(289 letters)
>mm_chr13_85801110_85801797
Length = 688
Score = 534 bits (276), Expect = e-156
Identities = 285/288 (98%), Gaps = 1/288 (0%)
Strand = Plus / Plus
Query: 1 cttggaataaaggagacaaaactccaagtgttatccagtcagtaaagtatgaaactcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttggaataaaggagacaaaactccaagtgttatccagtcagtaaagtatgaaactcctt 260
Query: 61 taaaccccattataaaaatgagtactcagtactgttgctgtttatgcactaatgttggat 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 taaaccccattataaaaatgagtactcagtactgttgccgtttatgcactaatgttggat 320
Query: 121 ggtgctgtgtattatttgagtaataaataccaagaagcttctgtgacatgaaagttttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtgctgtgtattatttgagtaataaataccaagaagcttctgtgacatgaaagttttat 380
Query: 181 ctctcttaagtaaaaaaaaaagaatataaggccatatgacatatagtcaggtctacatcg 240
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 ctctcttaagtaaaaaaaaa-gaatataaggccatatgacacatagtcaggtctacatcg 439
Query: 241 taactctctgatggtgttagactgatacctggagagaataaattggtc 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taactctctgatggtgttagactgatacctggagagaataaattggtc 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 688
Length adjustment: 9
Effective length of query: 280
Effective length of database: 679
Effective search space: 190120
Effective search space used: 190120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
