Query= MSMg01no359_g14.b1 MSMg01no359_g14.b1 CHROMAT_FILE:
MSMg01no359_g14.b1 PHD_FILE: MSMg01no359_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:54 2005
(468 letters)
>mm_chr13_56138616_56139488
Length = 873
Score = 806 bits (417), Expect = 0.0
Identities = 454/467 (97%), Gaps = 5/467 (1%)
Strand = Plus / Minus
Query: 7 gaattc-acagtaagaacatgagaagctggacaattggtgacagacaaagcagagctgta 65
|||||| |||| ||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 673 gaattcaacagcaagaacacaataagctggacaattggtgacagacaaagcagagctgta 614
Query: 66 caactaagtcccacaccaacagtcatggaggttaacaaatcaggggtgagcacctgcaac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 caactaagtcccacaccaacagtcatggaggttaacaaatcaggggtgagcacctgcaac 554
Query: 126 atctttgcagtgtgcatctacagcaaagaaggctgctgcagactgttgaagacagcccag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 atctttgcagtgtgcatctacagcaaagaaggctgctgcagactgttgaagacagcccag 494
Query: 186 ccatcagtcaccatcctcctccctaaggccaccactgcaggaagcaccgattgtaagttc 245
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 493 ccatcagtcaccatcctcctccctaaggccaccactgcaagaagcaccgattgtacgttc 434
Query: 246 tgtagaatcaggagaga-a-aaaaaaaatgggatcaccaagcccagctaaaggtagaaaa 303
|| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tggagaatcaggagagagagaaaaaaaatgggatcaccaagcccagctaaaggtagaaaa 374
Query: 304 aacaaaaaaacaaaaacagaacaaattagaaagacaatgaataacagcatattgttacac 363
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 373 aacaaaaaaacaaaaacagaacaaattagaaagacaatgaatgacagcatattgttacac 314
Query: 364 ccagataaaggtagaaaaaaaaa--ccaaaaacagaacaaatcagaaagacaatgagtaa 421
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 313 ccagataaaggtagaaaaaaaaaaaccaaaaacagaacaaatcagaaagacaatgagtaa 254
Query: 422 catagcatattgttgtggcattaactgcgtcacattccttcggaaaa 468
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 catagcatattgttgtggcattaactgcgtcacattccttcggaaaa 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 873
Length adjustment: 10
Effective length of query: 458
Effective length of database: 863
Effective search space: 395254
Effective search space used: 395254
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_g14.g1 MSMg01no359_g14.g1 CHROMAT_FILE:
MSMg01no359_g14.g1 PHD_FILE: MSMg01no359_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:54 2005
(367 letters)
>mm_chr13_55959291_55960056
Length = 766
Score = 687 bits (355), Expect = 0.0
Identities = 364/367 (99%), Gaps = 1/367 (0%)
Strand = Plus / Plus
Query: 1 agggtgttctgggaaaggacctggagctgtgaagagcaggtctatgtgggggatgctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggtgttctgggaaaggacctggagctgtgaagagcaggtctatgtgggggatgctctg 260
Query: 61 tggtctgcggttggtctggggaatgattcttccttataggcaggtatgagagacaaggag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtctgcggttggtctggggaatgattcttccttataggcaggtatgagagacaaggag 320
Query: 121 cagatggctggactcaggagaaagtttgatctccgctcctagtgtgtgatctggaataga 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 cagatggctggactcaggagaaagtttgatctccgctccta-tgtgtgatctggaataga 379
Query: 181 gagagctggcgtgttaggaattacattctggtcacatggggctctggcaggcagacatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gagagctggcgtgttaggaattacattctggtcacatggggctctggcaggcagacatag 439
Query: 241 accattgctatctacacacgaagaggtaattcctgctgagggagcagcttgggcgagact 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 440 accattgctatctacacacgaagaggtgattcctgctgagggagcagcttgggcgagact 499
Query: 301 tttctcctaagcacaggtctgccctctgaaggggtctcctctctttctgaatccaggttt 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttctcctaagcacaggcctgccctctgaaggggtctcctctctttctgaatccaggttt 559
Query: 361 cttcctg 367
|||||||
Sbjct: 560 cttcctg 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 766
Length adjustment: 9
Effective length of query: 358
Effective length of database: 757
Effective search space: 271006
Effective search space used: 271006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
