MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-359J13
Chromosome	13 (Build37)
Map Location	31,167,136 - 31,167,505
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Mboat1, Agtr1a, Uqcrfs1, Dusp22, LOC666443, Irf4, Exoc2, Hus1b, EG432743, LOC100041257
Downstream gene	LOC100041266, G630018N14Rik, LOC100042491, Foxq1, LOC100041312, Foxf2, Foxc1, 4930548F15Rik, Gmds, LOC666212
Link	Open Mouse BAC browser

Click to get alignment info.

name	Mboat1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218121 MGI:2387184
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Agtr1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11607 MGI:87964
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Uqcrfs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66694 MGI:1913944
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dusp22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105352 MGI:1915926
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC666443 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666443
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Irf4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16364 MGI:1096873
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Exoc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66482 MGI:1913732
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hus1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210554 MGI:2671003
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG432743 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432743 MGI:3644017
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041257 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041257
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100041266 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041266
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	G630018N14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414126 MGI:3041239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100042491 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042491
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Foxq1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15220 MGI:1298228
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041312 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041312
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Foxf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14238 MGI:1347479
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Foxc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17300 MGI:1347466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930548F15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75300 MGI:1922550
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	Gmds (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218138 MGI:1891112
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666212 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666212
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Mboat1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385553 GeneID:218121 MGI:2387184
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane bound O-acyltransferase domain containing 1 transcript_id : NM_153546.2

name	Agtr1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341112 GeneID:11607 MGI:87964
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : angiotensin II receptor, type 1a transcript_id : NM_177322.2

name	Uqcrfs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385167 GeneID:66694 MGI:1913944
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 transcript_id : NM_025710.1

name	Dusp22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892215 GeneID:105352 MGI:1915926
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual specificity phosphatase 22 transcript_id : NM_134068.2

name	Dusp22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802163 GeneID:105352 MGI:1915926
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual specificity phosphatase 22 transcript_id : NM_001037955.2

name	Irf4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305518 GeneID:16364 MGI:1096873
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interferon regulatory factor 4 transcript_id : NM_013674.1

name	Exoc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543676 GeneID:66482 MGI:1913732
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exocyst complex component 2 transcript_id : NM_025588.2

name	Hus1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23346476 GeneID:210554 MGI:2671003
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Hus1 homolog b (S. pombe) transcript_id : NM_153072.1

name	EG432743 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372459 GeneID:432743 MGI:3644017
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG432743 transcript_id : NM_001013788.2

name	G630018N14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94394751 GeneID:414126 MGI:3041239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA G630018N14 gene, transcript variant 2 transcript_id : XM_982005.1

name	G630018N14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94394749 GeneID:414126 MGI:3041239
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA G630018N14 gene, transcript variant 1 transcript_id : XM_981964.1

name	LOC100042491 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263960 GeneID:100042491
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042491 transcript_id : XM_001478246.1

name	Foxq1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560692 GeneID:15220 MGI:1298228
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box Q1 transcript_id : NM_008239.3

name	LOC100041312 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263933 GeneID:100041312
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041312 transcript_id : XM_001476139.1

name	Foxf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753903 GeneID:14238 MGI:1347479
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box F2 transcript_id : NM_010225.1

name	Foxc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50345971 GeneID:17300 MGI:1347466
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box C1 transcript_id : NM_008592.2

name	4930548F15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94394769 GeneID:75300 MGI:1922550
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 4930548F15 gene transcript_id : XM_984432.1

name	Gmds (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892142 GeneID:218138 MGI:1891112
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GDP-mannose 4, 6-dehydratase transcript_id : NM_146041.2

name	Mboat1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956314 CCDS:CCDS26414.1 GeneID:218121 MGI:2387184
definition	GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : membrane bound O-acyl transferase family, member 1 product : O-acyltransferase (membrane bound) domain containing 1 protein_id : NP_705774.1

name	Agtr1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893437 CCDS:CCDS26415.1 GeneID:11607 MGI:87964
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005768 - endosome [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0001596 - angiotensin type I receptor activity [Evidence IDA]; GO:0004945 - angiotensin type II receptor activity [Evidence IEA]; GO:0004947 - bradykinin receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0002019 - angiotensin mediated regulation of renal output [Evidence IMP]; GO:0001568 - blood vessel development [Evidence IGI]; GO:0002035 - brain renin-angiotensin system [Evidence IMP]; GO:0042756 - drinking behavior [Evidence IMP] [Evidence IGI]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IC]; GO:0001822 - kidney development [Evidence IGI] [Evidence IMP]; GO:0043524 - negative regulation of neuron apoptosis [Evidence IMP]; GO:0001991 - regulation of blood pressure by circulatory renin-angiotensin [Evidence IGI]; GO:0002001 - renin secretion into blood stream [Evidence IMP]; GO:0002018 - renin-angiotensin regulation of aldosterone production [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : angiotensin receptor 1a product : angiotensin receptor 1 protein_id : NP_796296.1

name	Uqcrfs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385168 CCDS:CCDS26416.1 GeneID:66694 MGI:1913944
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005746 - mitochondrial electron transport chain [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 protein_id : NP_079986.1

name	Dusp22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527288 CCDS:CCDS26417.1 GeneID:105352 MGI:1915926
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008138 - protein tyrosine/serine/threonine phosphatase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0046330 - positive regulation of JNK cascade [Evidence IDA]; GO:0006470 - protein amino acid dephosphorylation [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence IMP] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : dual specificity phosphatase TS-DSP2 isoform b protein_id : NP_598829.1

name	Dusp22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83816915 CCDS:CCDS26418.1 GeneID:105352 MGI:1915926
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004721 - phosphoprotein phosphatase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008138 - protein tyrosine/serine/threonine phosphatase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0046330 - positive regulation of JNK cascade [Evidence IDA]; GO:0006470 - protein amino acid dephosphorylation [Evidence IEA]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0007179 - transforming growth factor beta receptor signaling pathway [Evidence IMP] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : dual specificity phosphatase TS-DSP2 isoform a protein_id : NP_001033044.1

name	Irf4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305519 CCDS:CCDS26419.1 GeneID:16364 MGI:1096873
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] [Evidence ISS]; GO:0008134 - transcription factor binding [Evidence ISS]; GO:0016563 - transcriptional activator activity [Evidence ISS] GO_process : GO:0043011 - myeloid dendritic cell differentiation [Evidence IMP]; GO:0045082 - positive regulation of interleukin-10 biosynthesis [Evidence ISS]; GO:0045368 - positive regulation of interleukin-13 biosynthesis [Evidence ISS]; GO:0045086 - positive regulation of interleukin-2 biosynthesis [Evidence ISS]; GO:0045404 - positive regulation of interleukin-4 biosynthesis [Evidence ISS]; GO:0045941 - positive regulation of transcription [Evidence ISS]; GO:0045622 - regulation of T-helper cell differentiation [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0042110 - T cell activation [Evidence ISS]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 function : transcription factor note : Sfpi1/PU.1 interaction partner product : interferon regulatory factor 4 protein_id : NP_038702.1

name	Exoc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313438 CCDS:CCDS26420.1 GeneID:66482 MGI:1913732
definition	GO_component : GO:0000145 - exocyst [Evidence TAS] GO_function : GO:0017160 - Ral GTPase binding [Evidence IDA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0045921 - positive regulation of exocytosis [Evidence TAS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : SEC5-like 1 product : SEC5 homolog protein_id : NP_079864.1

name	Hus1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346477 CCDS:CCDS26421.1 GeneID:210554 MGI:2671003
definition	codon_start : 1 product : Hus1 checkpoint homolog b protein_id : NP_694712.1

name	EG432743 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701474 GeneID:432743 MGI:3644017
definition	codon_start : 1 product : hypothetical protein LOC432743 protein_id : NP_001013810.1

name	G630018N14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94394752 GeneID:414126 MGI:3041239
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_987099.1

name	G630018N14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94394750 GeneID:414126 MGI:3041239
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_987058.1

name	LOC100042491 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263961 GeneID:100042491
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478296.1

name	Foxq1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560693 CCDS:CCDS26423.1 GeneID:15220 MGI:1298228
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0031069 - hair follicle morphogenesis [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : satin; HNF-3/forkhead homolog 1; HNF-3/forkhead homolog 1 like product : forkhead box Q1 protein_id : NP_032265.3

name	LOC100041312 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263934 GeneID:100041312
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476189.1

name	Foxf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753904 CCDS:CCDS26424.1 GeneID:14238 MGI:1347479
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0048566 - embryonic gut development [Evidence IGI]; GO:0042249 - establishment of polarity of embryonic epithelium [Evidence IMP] [Evidence IGI]; GO:0030198 - extracellular matrix organization and biogenesis [Evidence IMP] [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : forkhead homolog 20 product : forkhead box F2 protein_id : NP_034355.1

name	Foxc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50345972 CCDS:CCDS26425.1 GeneID:17300 MGI:1347466
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0001503 - ossification [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : mesoderm/mesenchyme forkhead 1; congenital hydrocephalus product : forkhead box C1 protein_id : NP_032618.2

name	4930548F15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94394770 GeneID:75300 MGI:1922550
definition	codon_start : 1 product : hypothetical protein LOC75300 protein_id : XP_989526.1

name	Gmds (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122523 CCDS:CCDS26426.1 GeneID:218138 MGI:1891112
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0050662 - coenzyme binding [Evidence IEA]; GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0044237 - cellular metabolism [Evidence IEA]; GO:0019673 - GDP-mannose metabolism [Evidence IEA] codon_start : 1 product : GDP-mannose 4, 6-dehydratase protein_id : NP_666153.1

name	LOC666443 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666443
definition	number : 1 pseudo : _no_value

name	LOC100041257 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041257
definition	number : 1 pseudo : _no_value

name	LOC100041257 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041257
definition	number : 2 pseudo : _no_value

name	LOC100041257 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041257
definition	number : 3 pseudo : _no_value

name	LOC100041257 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041257
definition	number : 4 pseudo : _no_value

name	LOC100041257 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041257
definition	number : 5 pseudo : _no_value

name	LOC100041257 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041257
definition	number : 6 pseudo : _no_value

name	LOC100041266 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041266
definition	number : 1 pseudo : _no_value

name	LOC100041266 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041266
definition	number : 2 pseudo : _no_value

name	LOC100041266 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041266
definition	number : 3 pseudo : _no_value

name	LOC100041266 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041266
definition	number : 4 pseudo : _no_value

name	LOC666212 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666212
definition	number : 1 pseudo : _no_value

name	LOC666212 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666212
definition	number : 2 pseudo : _no_value

clone name	MSMg01-184N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106O08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-361L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115B05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-538P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168L15
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-359J13.T7 (MSMg01no359_j13.b1)	MSMg01-359J13.TJ (MSMg01no359_j13.g1)
ACC	AG468974	AG468975
length	818	737
length of high quality (start - end)	88 (31 - 118)	370 (62 - 431)
definition	CHROMAT_FILE: MSMg01no359_j13.b1 PHD_FILE: MSMg01no359_j13.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:54:07 2005	CHROMAT_FILE: MSMg01no359_j13.g1 PHD_FILE: MSMg01no359_j13.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:54:07 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTGAAAGAGC TGCATGCATGGCCCTGGGTTAAGAGAAGGGCAGAGGAGAAGGAGGAGGAG GAAGAGGAGGAGGAGGGTGTCTCCCCTTTTCTTCTTTCTTCTCTTTTCTT TCCCCGCTTCTTTTCCCCCTTTCCTCTGCTTTCTCCCTCTCTCTTGTCGC CTCTTCCCCTGCCCCTTTTCCCTTTTCCCCTTGTCCCTTCCCTTCTTTTC TCGCCCCTTTCCCCCTTTCCCCCTTTCCTTTCTTTTTTCCTTTCTCCCTT TTTCTTTGCCTCCTCCTCCCTTTCTTCCTCCTTTTTCTTTTTTCTCTTTC CCCCTCCTTTTCTCTTTCCTTCTCTTTTTTTTCCTTTCCCTTTTCCCTTT TTTTTCCCCTTTCTTCTTCTTCCTCTTTCTTTTCTTTCCTTCCGTCTCGT CTTCTTCTTTCCCTCTCTCTCCCCTTTTTCCCTCTCTTTCTGTCTTCCCC TCTCTCTTCTCCCCTTTTTTTTTTTCCCTCTTCCTCTCCCTTTTTTTTTT TCTTTTCTTTCCCTCCCCCCTTTCTCTTTTCTTTTTCTTTTTTTTTCCCC CCCTCTTTTTTTTCTCTCTCACCCTCTTCTTTTTCTTTTCCCCCTCCTCC CTTTTCCCTTTCTCTTCTCCTCTCTCCCCCTTTTCCTTCCCCCTCCCTTT TTTTTCTTCTCCCTCCCTCCTCCTCCCTCTTTTCTTCTTTTCTCCCCTTT TCTTTTTTCTCCCTATTTCCCTTCTCCCTTTCCTCTCTCTCCCTTTTTTC CTCTCGTCCTCTTTTTTG	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXCTTCTTCCTGAAAAAGAAATGTGTGATTAACAAATCCAA GAGAAGAAGAAATAAAATAAATACTTGATTTAAATTTTTCTAAGTCTGTT AAAGTTTCTCAGGAAATCTCAGATTCCTCGCTTTAATACTTAGTGTTTAA CATCTCTTGCTGTGCTTTCAATTGGAAAGTTTAAAAAAAAATACACGTAC TGAAAGTGATATACCCAAAACTCAAGCGCTCACTCTTCAAGACTAACCAA TGTTAATGTGTTAAAATATCTTCCTCAGATCATCTTTTATATGAAATAAA TAAAGGATTACTGGTAGAGCCAGAGTCTCCTCTGTGTCCTTCCCTGCTAA CCTGCCATGTTGGAGAAGAGAAGGATGGGGGGGTGTGTTTTCTCTCCCCC TTTTTCCTCTTTCTTTCTCCTCCGTTTTCTCCCCTCTTTTTTTTCCTTCT CTTTTTTTCCCCTTTTTCCCCCTCCTTTTCTCTCTTCTTTTTTTCCCCTT TCTTTTTTTTTTTTTTTCCCCCCCTTCCTTCCTTCCTTCTTTTTTTTTTT TTCCCTCCTTTTTCTTCTTTCCTTTTTTTTCTTCCTCCTTCCTCTTTCTT TTTTTTTTCCCCGTTCCCTTTCTTTTTTTTCCTTCCTCCTTGCCCGCTGT TTCCCGCTCCCTCCCTTGTCTTTTTTTTGCCCCCCCG
quality values	Open. Hide. 21 23 19 12 12 18 19 25 31 39 24 18 11 10 15 9 11 11 11 13 19 30 34 59 43 26 16 17 15 15 19 31 44 59 37 32 32 37 37 37 44 43 41 29 29 28 28 34 37 37 37 37 39 37 37 37 37 37 37 37 43 37 37 36 36 41 59 39 41 47 50 50 50 50 48 48 48 48 48 47 47 47 47 47 57 57 57 57 57 48 48 48 59 57 57 57 57 57 59 57 57 57 48 48 48 57 57 48 48 48 48 48 48 34 34 30 14 19 8 8 8 8 8 8 13 8 8 8 15 19 19 15 15 11 10 10 10 10 8 8 9 9 12 9 11 11 15 15 21 21 28 12 10 8 8 10 10 17 15 10 8 8 8 8 8 19 16 12 15 12 12 12 18 11 11 8 8 8 8 8 8 6 8 8 8 10 11 10 10 10 10 13 17 12 12 11 11 17 13 10 12 12 8 8 8 10 8 8 13 9 9 9 10 11 12 12 12 9 9 11 12 12 15 22 29 37 19 18 11 11 10 8 8 8 13 11 12 14 16 12 10 10 10 15 14 17 18 15 14 6 6 8 6 8 8 8 10 15 16 14 13 13 12 10 10 10 13 11 12 10 8 8 8 10 17 13 15 13 8 10 6 6 6 13 14 15 12 11 10 10 10 13 10 10 12 8 8 8 11 12 11 9 15 8 8 8 8 10 8 8 6 6 8 8 8 8 8 8 8 8 12 19 12 10 10 12 16 14 19 19 17 15 13 11 10 8 10 10 10 13 10 8 8 8 8 8 8 9 10 13 10 10 12 21 12 11 11 21 15 17 9 8 8 8 10 19 19 24 24 26 26 28 21 24 15 15 15 20 10 10 12 11 11 11 21 21 22 28 28 27 23 19 13 13 14 19 15 19 17 24 19 29 17 18 11 11 11 11 12 11 17 21 26 11 8 8 8 8 8 8 8 15 25 9 10 8 8 8 8 9 9 10 15 19 17 15 8 9 8 8 8 8 6 6 6 6 8 7 7 9 9 10 10 18 14 14 19 9 10 15 13 10 10 16 14 11 11 8 15 13 12 8 9 9 10 17 19 18 14 11 9 10 8 10 8 8 8 8 8 8 7 9 9 9 8 8 15 13 10 8 6 9 10 10 8 8 8 8 9 9 13 14 10 12 9 10 9 9 9 10 9 22 11 12 10 10 11 12 10 10 11 10 8 14 9 9 17 9 12 15 18 22 22 32 29 23 27 28 24 15 12 10 10 8 7 6 6 6 8 13 10 14 13 17 16 18 15 9 9 10 8 12 9 9 9 16 20 20 24 21 14 23 20 21 21 17 14 12 18 18 24 21 18 25 22 17 18 16 11 12 10 11 10 9 9 9 9 9 9 13 13 16 11 10 9 10 9 9 9 9 10 10 15 15 17 10 8 8 8 8 10 13 17 11 11 11 22 22 12 12 11 11 8 11 8 8 8 8 23 23 12 10 9 9 9 9 13 11 9 7 7 6 8 8 21 17 17 16 10 10 10 15 16 12 15 22 19 21 11 10 8 8 8 8 8 8 13 15 18 20 13 13 9 9 8 6 8 8 8 11 11 19 12 12 10 10 10 8 8 8 14 15 9 9 9 13 9 9 15 17 11 8 8 8 9 8 8 8 8 13 13 15 8 8 8 8 10 11 12 12 12 13 10 11 8 8 8 8 8 8 17 19 20 22 14 14 14 12 14 12 12 10 15 9 9 9 14 11 11 11 9 9 9 11 13 9 8 8 15 17 10 10 10 15 19 10 12 8 8 8 8 9 9 15 10 11 11 22 19 19 8 11 9 8 6 6 6 6 6 6 7 7 12 21 11 10 7 7	Open. Hide. 18 18 27 27 39 36 34 39 39 39 37 37 44 34 30 32 28 20 18 26 32 43 34 28 22 28 28 31 28 39 39 39 37 39 30 30 30 37 31 31 37 37 37 37 37 39 26 28 30 30 30 30 59 59 59 33 33 36 36 50 50 59 57 57 57 57 57 57 57 57 57 53 53 57 57 57 57 50 47 47 47 42 42 43 47 47 68 68 68 51 50 50 50 50 50 50 50 47 47 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 59 59 59 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 59 59 68 68 68 59 59 59 59 59 59 59 68 68 68 59 59 59 68 68 59 59 54 54 54 54 54 57 57 59 59 59 59 59 48 48 43 57 43 43 43 43 43 48 48 59 59 48 48 48 59 59 48 43 43 39 39 35 37 37 39 31 28 35 33 29 27 28 30 21 10 8 6 6 6 6 9 10 8 8 8 8 8 8 8 8 8 8 8 10 10 11 8 8 8 8 11 10 13 13 10 10 9 12 8 8 8 8 8 10 11 8 6 9 10 10 6 8 6 6 8 8 6 8 8 10 11 8 9 9 14 10 10 10 13 13 8 9 12 9 9 10 13 8 8 8 8 10 11 17 12 22 24 22 22 12 10 10 10 14 15 14 12 12 14 9 9 9 7 6 7 6 8 8 12 12 24 28 37 23 19 12 11 15 15 13 11 15 9 9 10 8 11 8 10 10 10 12 17 24 29 29 14 12 10 10 8 8 9 15 23 19 12 10 8 8 8 8 8 8 8 8 10 9 10 13 23 23 24 22 17 11 14 13 15 12 12 16 15 9 9 8 8 8 8 8 8 12 29 10 10 9 9 8 8 10 10 10 8 8 8 10 8 8 10 9 9 9 9 9 8 10 8 9 10 10 10 10 9 10 10 8 10 10 11 12 8 8 9 9 8 9 11 19 19 19 15 8 8 8 10 8 8 8 10 9 10 10 15 15 13 10 10 10 23 19 18 16 15 15 10 11 8 8 8 10 8 8 8 12 12 9 8 8 8 8 8 8 10 15 15 10 13 11 8 8 8 8 8 8 10 10 10 13 15 10 8 9 9 13 14 9 8 10 8 9 9 9 9 17 22 16 16 11 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no359_j13.g1 MSMg01no359_j13.g1 CHROMAT_FILE:
MSMg01no359_j13.g1 PHD_FILE: MSMg01no359_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:07 2005
         (370 letters)



>mm_chr13_31166936_31167705
          Length = 770

 Score =  708 bits (366), Expect = 0.0
 Identities = 369/370 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttcttcctgaaaaagaaatgtgtgattaacaaatccaagagaagaagaaataaaataaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcttcctgaaaaagaaatgtgtgattaacaaatccaagagaagaagaaataaaataaa 260

                                                                       
Query: 61  tacttgatttaaatttttctaagtctgttaaagtttctcaggaaatctcagattcctcgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacttgatttaaatttttctaagtctgttaaagtttctcaggaaatctcagattcctcgc 320

                                                                       
Query: 121 tttaatacttagtgtttaacatctcttgctgtgctttcaattggaaagtttaaaaaaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaatacttagtgtttaacatctcttgctgtgctttcaattggaaagtttaaaaaaaaa 380

                                                                       
Query: 181 tacacgtactgaaagtgatatacccaaaactcaagcgctcactcttcaagactaaccaat 240
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacacgtactgaaagtgatatatccaaaactcaagcgctcactcttcaagactaaccaat 440

                                                                       
Query: 241 gttaatgtgttaaaatatcttcctcagatcatcttttatatgaaataaataaaggattac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttaatgtgttaaaatatcttcctcagatcatcttttatatgaaataaataaaggattac 500

                                                                       
Query: 301 tggtagagccagagtctcctctgtgtccttccctgctaacctgccatgttggagaagaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggtagagccagagtctcctctgtgtccttccctgctaacctgccatgttggagaagaga 560

                     
Query: 361 aggatggggg 370
           ||||||||||
Sbjct: 561 aggatggggg 570


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space:   274721
Effective search space used:   274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information