Query= MSMg01no360_l06.b1 MSMg01no360_l06.b1 CHROMAT_FILE:
MSMg01no360_l06.b1 PHD_FILE: MSMg01no360_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:31 2005
(352 letters)
>mm_chr13_59848598_59849349
Length = 752
Score = 520 bits (269), Expect = e-152
Identities = 321/347 (92%), Gaps = 17/347 (4%)
Strand = Plus / Plus
Query: 6 ggaattcttgcttctgcctggatttttagtctcaggcacaaatgtcttccagtacatgtc 65
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ggaattcttgcttctggctggatttttagtctcaggcacaaatgtcttccagtacatgtc 274
Query: 66 acctatgaaatagcttcttttcactcagattaggaagaaaac-ttcctttctacatttat 124
||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 275 acctatgaaatagcttcttttcactcagatt----------cattcctttctacatttat 324
Query: 125 aaatgctgatgaggacattttcatgttcctgacagtactttcatgtctttaatcagggtg 184
||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 325 aaatgctgatgagaacattttcatgttcctgacagtactttcacatctttaatcggggtg 384
Query: 185 gactcaaatcgtcaaactcatataaaatatagattatgctaaatggatacaattgcatct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gactcaaatcgtcaaactcatataaaatatagattatgctaaatggatacaattgcatct 444
Query: 245 tcaggcattctttggtttaatttattccatttatgtttctgaaattagcgaaacttcaag 304
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 445 tcaggcattctttggtctaatttattccatttatgtttctgaaattagtgaaacttcaag 504
Query: 305 tgaactgagttacacacacacacacagactcagacacagagacacac 351
| |||||||||||||| ||||||| ||| ||||||||||||||
Sbjct: 505 ttaactgagttacacagacacaca--gac----acacagagacacac 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_l06.g1 MSMg01no360_l06.g1 CHROMAT_FILE:
MSMg01no360_l06.g1 PHD_FILE: MSMg01no360_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:31 2005
(354 letters)
>mm_chr13_60044905_60045658
Length = 754
Score = 630 bits (326), Expect = 0.0
Identities = 347/354 (98%)
Strand = Plus / Minus
Query: 1 ttctgtgagtattcttttggagaatattgtttctcctcagtcattattcctctgacctaa 60
||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||
Sbjct: 554 ttctgtgagtattctttaggagaatattgtttcttttcggtcattattcctctgacctaa 495
Query: 61 ctctggtccagcattacaggcaactcagttggaggtagagttaattatgcattcgttgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ctctggtccagcattacaggcaactcagttggaggtagagttaattatgcattcgttgga 435
Query: 121 gattctactccccagagctaggctgggcagctgcagatctccacacctgttggtcacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gattctactccccagagctaggctgggcagctgcagatctccacacctgttggtcacatt 375
Query: 181 acatgtccagcctcacccagctcaggaagttattattccttcccaattccttcctgcagc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 374 acatgtccagcctcacccagctcaggaagttattattccttcccaattccttcctgcaac 315
Query: 241 atttgccaagcaacagcggtactcaacactcacttcaactagaattacaatgtattcaca 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 314 atttgccaagcaacagcggtacacaacactcacttcaactagaattacaatgtatccaca 255
Query: 301 cagagtgccatccaaggctcagccctgcctgcctgataactcacagacgctcac 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cagagtgccatccaaggctcagccctgcctgcctgataactcacagacgctcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|