Query= MSMg01no361_d24.b1 MSMg01no361_d24.b1 CHROMAT_FILE:
MSMg01no361_d24.b1 PHD_FILE: MSMg01no361_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:14 2005
(473 letters)
>mm_chr13_30437684_30438557
Length = 874
Score = 499 bits (258), Expect = e-145
Identities = 264/266 (99%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 5 gaattcttaaaatacatcatgtcagctggacatggggcttggggtccttataagcctcag 64
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 418 gaattcttaaaatacatcatgtcagctggacatggggcttgaggtccttataagcctcag 359
Query: 65 tacttgggagagaagccaacacaggagactcaaaatgcaaaggtgactgggtaaaactag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tacttgggagagaagccaacacaggagactcaaaatgcaaaggtgactgggtaaaactag 299
Query: 125 gtctcaaaataaaggttaaagg-aaaaaaaatctgttgttgtgactcaagagtacatcgt 183
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 298 gtctcaaaataaaggttaaaggaaaaaaaaatctgttgttgtgactcaagagtacatcgt 239
Query: 184 gtataaggtcctgggttcaatccccagtagcgttcacacacacacacacacacacacaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gtataaggtcctgggttcaatccccagtagcgttcacacacacacacacacacacacaca 179
Query: 244 cacacacacacacacacacacacaca 269
||||||||||||||||||||||||||
Sbjct: 178 cacacacacacacacacacacacaca 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 159
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 874
Length adjustment: 10
Effective length of query: 463
Effective length of database: 864
Effective search space: 400032
Effective search space used: 400032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_d24.g1 MSMg01no361_d24.g1 CHROMAT_FILE:
MSMg01no361_d24.g1 PHD_FILE: MSMg01no361_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:14 2005
(415 letters)
>mm_chr13_30251277_30252091
Length = 815
Score = 717 bits (371), Expect = 0.0
Identities = 404/415 (97%)
Strand = Plus / Plus
Query: 1 tctctggggttcttcggaagattctgttaatatctgaatgaacaagttgtgggagtcaaa 60
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 201 tctctggggttcttcggaagattttgttaatatctgaatgaacgagttgtgggagtcaaa 260
Query: 61 ggtggtttagaggaataaataggcaaagctatttttatcctaaagatgtttaaatttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 ggtggtttagaggaataaataggcaaagctatttttatcctaaagatgtttaaatttgtc 320
Query: 121 ataagcatttctgaccaacttgtgagtagtttatagctgtgtttacaagctctagctttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 ataagcatttctgaccaacttgtgagtagtttatagctgtgtttacaagctctagcttgt 380
Query: 181 gcccaaggctgagcaggtcaccatgccaacaccttcctgtgctctttggaagtcagagag 240
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 381 gcccaaggctgagcaggtcaccatgccaacgccttcctgtgctctttggaaggcagagag 440
Query: 241 tggagctgttaaatgaactagaaccagtcattgtgactgactacaggttctgtggtgtgg 300
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 441 tggagctgttaaatgaactagaaccagtcattgtgactgaccccaggttctgtggtgcgg 500
Query: 301 atttcctcctgaatttctggttagtttaatctcattctggaagtatatattttctcctaa 360
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 atttcctcctgaacttctggttagtttaatttcattctggaagtatatattttctcctaa 560
Query: 361 atcccacggcaagacacagtttccacctctttatactgtgactccaacatgtacc 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcccacggcaagacacagtttccacctctttatactgtgactccaacatgtacc 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
