Query= MSMg01no362_g09.b1 MSMg01no362_g09.b1 CHROMAT_FILE:
MSMg01no362_g09.b1 PHD_FILE: MSMg01no362_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:45 2005
(464 letters)
>mm_chr13_26758454_26759315
Length = 862
Score = 839 bits (434), Expect = 0.0
Identities = 453/460 (98%), Gaps = 2/460 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtcatagcttcttgggttcatttgaaatgacattttgtgtcatgattaattca 64
||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 205 gaattctgtcagaggttcttgggttcatttgaagtgacattttgtgtcatgattaattca 264
Query: 65 caaggtaactaccctccaggtctaacagtgagagggattatagcatatttactcatgggt 124
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 265 caaggtaactaccctccaggtctaacagtgagagggattatagcatatttacgcatgggt 324
Query: 125 agcagaaaacacccttgactcaagacatctttcccaagtgcttagcccttcaactgctca 184
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 325 agcagaaaacacccttgactcaagacatctttcccaagagcttagcccttcaactgctca 384
Query: 185 gtgcagaacaaaagaacaatgaatacaatggggagggagtgttcctgaaacccaagtctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgcagaacaaaagaacaatgaatacaatggggagggagtgttcctgaaacccaagtctc 444
Query: 245 cactcctgccctcacagaatgaaaagttcgataattcctgttattgttctgaggaagcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cactcctgccctcacagaatgaaaagttcgataattcctgttattgttctgaggaagcaa 504
Query: 305 cataaagtttctaaacaactgtaagttattttaatctccattaaatgtttcacaaattca 364
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 505 cataaagtttctaaacaactgt--gttattttaatctccattaaatgtttcacaaattca 562
Query: 365 tagctgacatcacaagtattttgttacaatatttataatggtttcaaagtgagggaattg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tagctgacatcacaagtattttgttacaatatttataatggtttcaaagtgagggaattg 622
Query: 425 tgactactcttaaggcagtcttaggggtttgtgactatag 464
||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgactactcttaaggcagtcttaggggtttgtgactatag 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 862
Length adjustment: 10
Effective length of query: 454
Effective length of database: 852
Effective search space: 386808
Effective search space used: 386808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_g09.g1 MSMg01no362_g09.g1 CHROMAT_FILE:
MSMg01no362_g09.g1 PHD_FILE: MSMg01no362_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:45 2005
(471 letters)
>mm_chr13_26908266_26909139
Length = 874
Score = 824 bits (426), Expect = 0.0
Identities = 461/474 (97%), Gaps = 3/474 (0%)
Strand = Plus / Minus
Query: 1 attagttgtccatatcttgtcagttctaacacgcatactcattatattgaattcttctaa 60
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 674 attagttgtctatatcttgtcagttctaacacacatactcattatattgaattcttctaa 615
Query: 61 ttattctgctcctttgggtgaatacctagaatgctttttgttgtttgaattgagctggta 120
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 614 ttactctgctcctttgggtgaatacctagaatgctttttgttgtttaaattgagctggta 555
Query: 121 acattttaaggtagaattcataactaaattccaataataagttttggaaaaaattaaaaa 180
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 554 acattttaaggtagaattcatatctaaattccaataataagtattggaaaaaattaaaaa 495
Query: 181 ttccaggattcttgattactgtaagatgcatggataccatattacatgaaaagaaaaagt 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttccaggattcttggttactgtaagatgcatggataccatattacatgaaaagaaaaagt 435
Query: 241 tcacattaaacataatcattttacaaacaggaatgaaaatgaatggagaatgaataaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 434 tcacattaaacataatcattttacaaacaggaatgaaaatgaatggagaatgaatgaaac 375
Query: 301 ctggggttatgggaaccagggtaatgtactgcttcagtgcattggtaaaaagac---gat 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 374 ctggggttatgggaaccagggtaatgtactgcttcagtgcattggtaaaaagacgttgat 315
Query: 358 aagtttttcatttggcaaatgtcgacactatgaccttagaattctgtcacctcaaagtgg 417
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 314 aagtttttcatttggcaaatgtcgacactatgaccttagtattctgtcacctcaaagtgg 255
Query: 418 ttaccagtaaatagagtggagtaatgaagccaacggcagcaaagtaacaaagaa 471
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 254 ttaccagtaaatagagtggagtaatgaagccaacagcagcaaagtaacaaagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 874
Length adjustment: 10
Effective length of query: 461
Effective length of database: 864
Effective search space: 398304
Effective search space used: 398304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
