Query= MSMg01no362_m18.b1 MSMg01no362_m18.b1 CHROMAT_FILE:
MSMg01no362_m18.b1 PHD_FILE: MSMg01no362_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:18 2005
(482 letters)
>mm_chr13_116013033_116013914
Length = 882
Score = 820 bits (424), Expect = 0.0
Identities = 469/486 (96%), Gaps = 5/486 (1%)
Strand = Plus / Plus
Query: 1 tgcagttcatcaaaatgccaataatggtcttcagaaaacaagaaagaagtacttaacatg 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 tgcagttcatcaaaatgccaataatggtctacagaaaacaagaaagaagtacttaacatg 260
Query: 61 cagaaagaaacaaaatattcaacctagttaaagtcatctgtccaaaattgagtgatgtag 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 cagaaagaaacaaaatattcaacctagttaaagtcatctgttcaaaattgagtgatgtag 320
Query: 121 aaagtattataatacctgtttaaaacacactgtagaaaccagtgacagagaaacatcacg 180
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 aaagtattataatacctgttcaaaacacactgtagaaaccagtgacagaggaacatcacg 380
Query: 181 atactcacagaacacttggcattgagtccaaagcagttctcagaaccgcttctgcagaca 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atactcacagaacactgggcattgagtccaaagcagttctcagaaccgcttctgcagaca 440
Query: 241 cccgattcccacaaatacaccatgtgcagacattggaggaaaggcagtcttttaataaaa 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 cccgattcccacaaatacaccatgtgcagacattggaggaaagacagtcttttaataaaa 500
Query: 301 cgcattaagaaaactggatattcacatgcagaaaactgaaacgaggggtcctcatccctc 360
| ||||||||||||||||||||||||||||||||||||||||| || || |||||||||
Sbjct: 501 catattaagaaaactggatattcacatgcagaaaactgaaacgaaggttc-tcatccctc 559
Query: 361 atttttctaaaaactt----aactcaacattgatcaaagtccttaatgtaagacataaaa 416
|||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 560 atttttctaaaaacttgattaactcagcattgatcaaagtccttaatgtaagacataaaa 619
Query: 417 cttagaagtactagaggaaacttgaggggaatacctgaagatgtgtgtgtgtgtgtgtgt 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gttagaagtactagaggaaacttgaggggaatacctgaagatgtgtgtgtgtgtgtgtgt 679
Query: 477 gtgtgt 482
||||||
Sbjct: 680 gtgtgt 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_m18.g1 MSMg01no362_m18.g1 CHROMAT_FILE:
MSMg01no362_m18.g1 PHD_FILE: MSMg01no362_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:18 2005
(443 letters)
>mm_chr13_116172113_116172955
Length = 843
Score = 857 bits (443), Expect = 0.0
Identities = 443/443 (100%)
Strand = Plus / Minus
Query: 1 accttgaatctggagagaaaaatcttactatttccacacttaatgttcatttttaaatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 accttgaatctggagagaaaaatcttactatttccacacttaatgttcatttttaaatca 584
Query: 61 ttcatttgtatgttttattttcattttgttccagtaaattgggttttgctgtgatctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ttcatttgtatgttttattttcattttgttccagtaaattgggttttgctgtgatctgat 524
Query: 121 tcatagaccaattgttcagtttttttgtgacactatttagtaaagatgaaacaattttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 tcatagaccaattgttcagtttttttgtgacactatttagtaaagatgaaacaattttta 464
Query: 181 cttttagacttaagaaaaattataggacaaattcattctagatatttctaagttgagttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 cttttagacttaagaaaaattataggacaaattcattctagatatttctaagttgagttt 404
Query: 241 gcttattagtgtgattacattgtaataaagtgttctgtttgtttttaattctttgaaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gcttattagtgtgattacattgtaataaagtgttctgtttgtttttaattctttgaaagt 344
Query: 301 ctatctgaaggcatgcactgttcaactagtgtctaaagtaatactgaaatgtgtgaggta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ctatctgaaggcatgcactgttcaactagtgtctaaagtaatactgaaatgtgtgaggta 284
Query: 361 tatgccctctgcttttgatgagcttttagtgaacactccatatggatgctccattcaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tatgccctctgcttttgatgagcttttagtgaacactccatatggatgctccattcaaat 224
Query: 421 ataaaatatgtgactatgatcac 443
|||||||||||||||||||||||
Sbjct: 223 ataaaatatgtgactatgatcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
