Query= MSMg01no364_e20.b1 MSMg01no364_e20.b1 CHROMAT_FILE:
MSMg01no364_e20.b1 PHD_FILE: MSMg01no364_e20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:22 2005
(411 letters)
>mm_chr13_8752555_8753368
Length = 814
Score = 141 bits (73), Expect = 6e-38
Identities = 189/233 (81%), Gaps = 23/233 (9%)
Strand = Plus / Plus
Query: 25 ggagtgtctt-aagactaatattggtgcagctgcaagctctcatgtaccaccaagtgcag 83
|||||||||| | ||| || ||| ||||||||||||||||||| || || |||||||||
Sbjct: 225 ggagtgtcttcaggaccaagattagtgcagctgcaagctctcacatagcatcaagtgcag 284
Query: 84 tccttcc--agagccaa---tgtttcttagaggttcaaacag-ctttataacaatttcta 137
|| ||| |||| ||| || ||| | |||||||||||| | | | ||||||||||
Sbjct: 285 accctccagagagacaacagtgcttc--a-aggttcaaacagtc-tcaaaacaatttctc 340
Query: 138 agtctcta-tggattgacct-aaatatagcaaaggctttgctggaacatttcactcaaag 195
|| ||||| | |||||| || ||| ||| |||||||||||||||||||||||||||||||
Sbjct: 341 agcctctact-gattga-ctcaaacatatcaaaggctttgctggaacatttcactcaaag 398
Query: 196 ccagacacaaatgttttactatatattttatttaaatga-a-acataaaggct 246
||||||||||| | ||||| |||||||||| | || | |||||||||||
Sbjct: 399 ccagacacaaagg-----ctatacattttatttata-gacagacataaaggct 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 814
Length adjustment: 9
Effective length of query: 402
Effective length of database: 805
Effective search space: 323610
Effective search space used: 323610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_e20.g1 MSMg01no364_e20.g1 CHROMAT_FILE:
MSMg01no364_e20.g1 PHD_FILE: MSMg01no364_e20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:22 2005
(367 letters)
>mm_chr10_57166895_57167662
Length = 768
Score = 538 bits (278), Expect = e-157
Identities = 345/384 (89%), Gaps = 27/384 (7%)
Strand = Plus / Plus
Query: 1 ctgtcttttacataatctgctaggccttcctttgagatattccttactactctgactctt 60
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 175 ctgtcttttacgtaatctgctaggccttcctttgagatattccttactactgtgactctt 234
Query: 61 attcacatgacttctatcacaactgt-------tctcaccattttggaagcatcacttta 113
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 235 attcacatgacttctatcacaactgtcctactgtctcaccattttggaagcatcacttta 294
Query: 114 gcatcttaactccactcccactatttcggcagctgtcatctgacttccacacacacgcca 173
||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||
Sbjct: 295 gcatcttaactccactcccactattacagcagctgtcatctgacttccacacacatgcca 354
Query: 174 tggcacaggcaaacccacacacagacatacaagtaagtaactataaaaagtataaaagct 233
||||||||||||||| | |||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 355 tggcacaggcaaaccaaaacacagacatgcaagtaagtaacgataaaaagtataaaagct 414
Query: 234 gtcttacaagcatgatttaaaaaaaa--------------------ttgcaaacatgcca 273
|||||||||||||||||||||||||| |||||||||||||
Sbjct: 415 gtcttacaagcatgatttaaaaaaaaaaaaaataaaaaaaaaaacattgcaaacatgccg 474
Query: 274 taataaaaaggaagttgttaaatagatacaaattcatatctcaacactgaaaacatacaa 333
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 475 taataaaaaggaagttgttaaatagatacaaattcatatctcaaccctaaaaacatacaa 534
Query: 334 atatgagataaagcatgaagtaca 357
||||||||||||||||||||||||
Sbjct: 535 atatgagataaagcatgaagtaca 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 768
Length adjustment: 9
Effective length of query: 358
Effective length of database: 759
Effective search space: 271722
Effective search space used: 271722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
