Query= MSMg01no364_j03.b1 MSMg01no364_j03.b1 CHROMAT_FILE:
MSMg01no364_j03.b1 PHD_FILE: MSMg01no364_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:43 2005
(373 letters)
>mm_chr13_111593908_111594680
Length = 773
Score = 656 bits (339), Expect = 0.0
Identities = 360/367 (98%)
Strand = Plus / Plus
Query: 5 gaattctctacaggtgaggtgtgagtactatacacaagagaacatcgtccatttaacacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctacaggtgaggtgtgagtactatacacaagagaacatcgtccatttaacacc 264
Query: 65 tggtttctagggtctaccattgtttactttataaatcagggcaagaactcaggtacttag 124
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggttactagggtctaccattgtttactttataaatcagggcaagaactcaggtacttag 324
Query: 125 tcagttattctatttcttgtaaaatggatcaaagcctttaaggctgagtgtaaggttgac 184
|||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |
Sbjct: 325 tcagttattctatttcttgtaaaatgaatcaaagactttaaggccgagtgtaaggttggc 384
Query: 185 tgctctgtcttattgtcttattgctctgacacagaatatgtctgctgagttcctctctga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgctctgtcttattgtcttattgctctgacacagaatatgtctgctgagttcctctctga 444
Query: 245 gacgatagtcttagtaacaataacaattgtatatttaatattgtttttccacttagattc 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 gacgatagtcttagtaacaataacaattgtatatttaatattgttattccacttagattc 504
Query: 305 tgatatttcaggtggactttggttgctattaatttacacagctcttcaaacatcattcaa 364
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgatattccaggtggactttggttgctattaatttacacagctcttcaaacatcattcaa 564
Query: 365 atcttca 371
|||||||
Sbjct: 565 atcttca 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_j03.g1 MSMg01no364_j03.g1 CHROMAT_FILE:
MSMg01no364_j03.g1 PHD_FILE: MSMg01no364_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:43 2005
(410 letters)
>mm_chr13_111764565_111765374
Length = 810
Score = 679 bits (351), Expect = 0.0
Identities = 396/411 (96%), Gaps = 2/411 (0%)
Strand = Plus / Minus
Query: 1 aaagtactttgactttgttataggagctgaagggatgattttggtaaaacgtggagatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aaagtactttgactttgttataggagctgaagggatgattttggtaaaacgtggagatct 551
Query: 61 tcagtttctggagaaggctggctttccagatgaccagttgagcttctggtaccctgtctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tcagtttctggagaaggctggctttccagatgaccagttgagcttctggtaccctgtctc 491
Query: 121 ccctgcttctccct-cttcggaataaatgtgatgccgggtgctatagcattcatcttctg 179
|||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 490 ccctgcttctccctcctt-ggaataaatgtgatgccaggtgctaaagcattcatcttctg 432
Query: 180 atcgtgaatccacttgaaacagaagaataaaaggggtaacttccatacagtcactgctga 239
||| ||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 431 atcacgaatccactcgaaacagaagaataaaaggagtaacttccatacagtcaccgctga 372
Query: 240 ttttcccacactacccgtcttcaggcttcctcttacatatctcattacatttagggtgct 299
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 371 ttttcccacattacccgtcttcaggcttcctcttacatatcccattacatttagggtgct 312
Query: 300 ccttcagtttggaattccagaatctctacaattatgactatgttagtggctcaggaagag 359
||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 311 ccttcagtttggaattccagaatctctacaattatgactatgttagtggtttaggaagaa 252
Query: 360 tggaagagtgatctttcaaccccgggagctaaggaatacgatgaagagatg 410
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 cggaagagtgatctttcaaccccgggagctaaggaatacgatgaagagatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
