Query= MSMg01no364_m03.b1 MSMg01no364_m03.b1 CHROMAT_FILE:
MSMg01no364_m03.b1 PHD_FILE: MSMg01no364_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:59 2005
(507 letters)
>mm_chr13_17972245_17973151
Length = 907
Score = 949 bits (491), Expect = 0.0
Identities = 500/503 (99%)
Strand = Plus / Minus
Query: 5 gaattcaagcatgctgtcaggaatgtaatttcaatgggaagtaaaccactattaggtttt 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gaattcaagcatgctgttaggaatgtaatttcaatgggaagtaaaccactattaggtttt 648
Query: 65 ttttcttttcctctgtggggctaagacacttgattaaaccgtttttcttgttgcacagtc 124
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 647 ttttcttttcctctgtggggctaagacacttgattaaacagtttttcttgttgcacagtc 588
Query: 125 ctaatttcataaggtcaaggagacactcaggcattccaggaaacaaatgtgtacatgatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ctaatttcataaggtcaaggagacactcaggcattccaggaaacaaatgtgtacatgatg 528
Query: 185 ttaccagaaacaggcattcaggaactctactgtctagatactacattcagcttaccataa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ttaccagaaacaggcattcaggaactctactgtctagatactacattcagcttaccataa 468
Query: 245 atatttgtccttgaagggtttgatttaatattttcacagactaggccatgtgcaaaatta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 atatttgtccttgaagggtttgatttaatattttcacagactaggccatgtgcaaaatta 408
Query: 305 gagttccctgtgtaaccccagccagcaggcccagcatggctgcgtgcactcattgcagtc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gagttccctgtgtaaccccagccagcaggcccagcatggctgcgtgcactcattgcagtc 348
Query: 365 ttgttgaaccagggtcctaaccactaacattgcaatttgctttgagaccttccctctcct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 347 ttgttgaaccagggtcctaaccactaacattgcaatttgctttgagaccttccctgtcct 288
Query: 425 gggtactaggtgctatgaagccagctgacagaagcatcacatgtcttgggctgatgccgc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gggtactaggtgctatgaagccagctgacagaagcatcacatgtcttgggctgatgccgc 228
Query: 485 tacccggttcatttatttgcaat 507
|||||||||||||||||||||||
Sbjct: 227 tacccggttcatttatttgcaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_m03.g1 MSMg01no364_m03.g1 CHROMAT_FILE:
MSMg01no364_m03.g1 PHD_FILE: MSMg01no364_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:59 2005
(519 letters)
>mm_chr13_17933078_17933996
Length = 919
Score = 977 bits (505), Expect = 0.0
Identities = 515/519 (99%), Gaps = 2/519 (0%)
Strand = Plus / Plus
Query: 1 tgggaagggaaaggctggctcccaataaagggataattggtcttatttctttagcatggt 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggaagggaaaggctggatcccaataaagggataattggtcttatttctttagcatggt 260
Query: 61 ctaaggtgagctggccttcctaaaggtggcacctatcacctccctggggttccttggcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaaggtgagctggccttcctaaaggtggcacctatcacctccctggggttccttggcta 320
Query: 121 gataattcatgagcccatctggaatgttagctctccacccaggtcagagagttctttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gataattcatgagcccatctggaatgttagctctccacccaggtcagagagttctttctt 380
Query: 181 tttactagaaggaaagcttttaatggcttcaatgccactgtagcacaaagacctcttgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttactagaaggaaagcttttaatggcttcaatgccactgtagcacaaagacctcttgcc 440
Query: 241 agaccatatccaagggcaaagtgtatccagaggcaaatgcatttgatttctcctggcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaccatatccaagggcaaagtgtatccagaggcaaatgcatttgatttctcctggcatt 500
Query: 301 aagcctaaaaacatcctcgttataagaacttgttttaatttcttaaaattggctttttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagcctaaaaacatcctcgttataagaacttgttttaatttcttaaaattggctttttta 560
Query: 361 ttttccattctgcagagaacacaaatattaaaaaaaaaaaaaaacaccaaaacccaaaac 420
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 ttttccattctgcagagaacacaaatattaaaaaaaaaaaaa--caccaaaacccaaaac 618
Query: 421 cactcatttaaatcagtttctttctattctacttaacaattagatcaatattaagcaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 cactcatttaaatcagtttctttctattctacttaacaattagatcaatattaagcaagg 678
Query: 481 aaccccagttttccattgtgaaggaaggttgaagtatgt 519
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 679 aaccgcagttttccattgtgaaggaaggttgaagtatgt 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
