GGTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGACACCGC
GGAATTCTTTGGGATATCGGAGCATTTAGAGGGCTTTAGGAATGATTTAA
AGGAGAGGAGAGAGACCCCTCCTGTTTTCTATCCTAGGGTAAATGCAGGA
AAACCAACACATTTAGCACCTTTAAATCTCAAGGCCTCTGAATTATCAAA
AACCAGGTCATTGTTCCCCTGCTGTGCAGGCCTCCAAGCTATACTGTACG
GGTTTAAGTGTGGCGATCACATTCTTTTTTTTTTTAAATCTGCTGGTAGA
GGAGCTATGAAAACTGACCTCTGATTTTTGCAGAAATCAGCACAGGCTCC
AAAGGAGTCGCTCAGAGGACTGCCCAGGGACGCCAGTGTGCGCAGCAGTT
CCCAAAGTTAGTTCTCAGGGCCCAGGAGATTTTTCTGGAGTCTCCGAAGC
CACAGGGCAGCAGCGTCCCAGGAACCAACGGTTCCTTCGAGGCTCACTTT
GTANAGATGACTTTCTCATACTACCTTGGAAGGTCGCACTAGTCATGGCA
AGAGAAGAGCACGGAAAAAAAACGTTCCCTTTGTAAGTGGTCCGCCAAAA
ACCTTTAGGAAAAACCCATTCTTGCAAAAGGCAAGTGGGATGGCAAAATT
TTCCTGAAAAAAATTATTTTCTACATTGGAACCCCCCGATCCTCCAGGGG
GTTCTCCGGGTGCTTTTCTTTTGGGGCTAATCTCCGAAAAGTAGTTCTAA
AAAATGGGGGGGGGGGGTGAAAAATTTTTTCCCCCTCAGTGTTTG

CAATATANTGNTANCCTGGGGGCCGCCTGCTTCAAACTTTAGGTGAACTA
TANAAGGATCCCCGGAATTCAGTACTTCTAACTAAAATCCCTGATATCTT
AAACAGCTTAAAAATGGTTTTATAGAACATAAAANTAAATGCNNCTAATC
ANNCTATTAAATGGATCCCGGGGCCCCCCCATGGGGAGACCTAGAAAAAA
TCCCCAAGGAACTGAGGGTACTGCACCCCTATTAGTGGGACAACATTATT
ATTTTAACCNTTCCCCCCAAAACTCGGGCCCTTNTTGTATTTTTTTCAAA
AAAAGCCAAAGCCCCTTTTTTTTAAAAAAACGCCCGTGGCCTGNAAATTT
TTTTCNCTCCTTCCCCCAGAACCGGCGAAGAAGAGGGGGGTGGAGGAAGG
GAGTGGGGTGGGGGAAGGAGGGAGGGGGGGGGGGGGGGGGCAAGGGGGTG
GGGGGGGGGTGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGAGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGAGAGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
NNCCTNNNNNNNNNNNNNNNNNTCANNNNNNCNNATAGTGGGGGGGGGGG
GGGGGGGGGGGGGGGGTGGGGCGCNNNNNNNNNNNNNNNNNNNCTATANN
TATTTTTTTTNNNNNCTGNNGGGGGGGGGGTGGTGGTTTCGGGGGGGGGG
AGGGGGGGGGGGGGGGGGGGGGGGGG

Query= MSMg01no364_m14.b1 MSMg01no364_m14.b1 CHROMAT_FILE:
MSMg01no364_m14.b1 PHD_FILE: MSMg01no364_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:02 2005
         (461 letters)



>mm_chr13_31906570_31907430
          Length = 861

 Score =  762 bits (394), Expect = 0.0
 Identities = 454/495 (91%), Gaps = 34/495 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttagagggctttaggaatgatttaaaggagaggagagagacccctcctgttttctatcct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 ttagagggctttaggaatgatttaaaggagaggagagagacccctcctgttttctatcct 226

                                                                       
Query: 61  agggtaaatgcaggaaaaccaacacatttagcacctttaaatctcaaggcctctga---- 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 227 agggtaaatgcaggaaaaccaacacatttagcacctttaaatctcaaggcctctgaattt 286

                                                                       
Query: 117 -----attatcaaaaaccaggtcattgttcccctgctgtg-------------------c 152
                |||||||||||||||||||||||||||||||||||                   |
Sbjct: 287 ccgtcattatcaaaaaccaggtcattgttcccctgctgtgcagagatccttaatggctac 346

                                                                       
Query: 153 aggcctccaagctatactgtacgggtttaagtgtggcgatcacattc------ttttttt 206
           |||||||||||||||||||||||||||||||||||||||||||||||      |||||||
Sbjct: 347 aggcctccaagctatactgtacgggtttaagtgtggcgatcacattcttttttttttttt 406

                                                                       
Query: 207 ttttaaatctgctggtagaggagctatgaaaactgacctctgatttttgcagaaatcagc 266
           |||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 407 tttttaatctgctggtagaggagctatgaaaactgacctctgatttaggcagaaatcagc 466

                                                                       
Query: 267 acaggctccaaaggagtcgctcagaggactgcccagggacgccagtgtgcgcagcagttc 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 acaggctccaaaggagtcgctcagaggactgcccagggacgccagtgtgcgcagcagttc 526

                                                                       
Query: 327 ccaaagttagttctcagggcccaggagatttttctggagtctccgaagccacagggcagc 386
           |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 527 ccaaagttagttctcagggcccgggagatttttctggactctccgaagccacagggcagc 586

                                                                       
Query: 387 agcgtcccaggaaccaacggttccttcgaggctcactttgtanagatgactttctcatac 446
           || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 587 agtgtcccaggaaccaacggttccttcgaggctcactttgtaaagatgactttctcatac 646

                          
Query: 447 taccttggaaggtcg 461
           |||||||||||||||
Sbjct: 647 taccttggaaggtcg 661


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space:   383801
Effective search space used:   383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)