NNTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAATCC
GCGGAATTCTGGCCCAGCTTCCTCTATACAGTGAGTTCCAGGCTGGCCCA
GGCTACCTAGTAAGACCCTTATATCTCAAGGGGGGAAAAAGTTATGCTCT
GATGTCCACATACCTCCTTTGGCATGAGCTTGCCTACATGCATACACACA
CACACACACACACACACACACACACATCACATCACATCACATCACATCAC
ATCATATCACATCACATCACACACATTTATATGCAGTAAAAATAAATAAA
ACAAGAAGTCTGAAATTTGGTATTAGAACTGCCTTAGACATCTACATAAG
TCCTTGAGTTAAAGAATTTTCATGATTTTTTTATTGAGATTGATTGATGG
ATAGATATATAGACCAGTGTACGTGGGTAGACATGTGCGTACATGGATGG
ACAAATAGGTATGGAAATTGGAAGGGTACCACATATTAAGTTAAATTTCT
AATAACTCTACTGGTCAAAACTAGGAGAGCTGCCTCCTGTGTGAATCTGT
GCCTTCATGTCTCTTTGAATGTGATCTACATACATGTAAAATGAATGAGT
GGAAAGAGTGGTACTTGTTCAGTATATAGTCCTGAATTGAACATACAAAA
ATATGCTTAAAAATTGAAAAGGGGTAAATAAATAAGAGGGGAAAACCTAT
GGTTAGTAGGGGGGAATATGAATATTACCACCGCGAAATAAAGATACCCC
TCCCCCTTATAATGTTACAACACGGGGGGTTTG

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXATGTCTTCCTCTGACCTCTATA
TGTGTGCCTCCCCCCAAATAAATAATCGCAATAAAAATTTTATTACCTGA
AATAGTATGATATTGGCATAAAAATACGTGCAGAAACTGAGGAAACAGAA
CAGAAAATCCCCCAAATAAATCCATTTATTTACTGCCAATTAAGACAGCA
GCAAAACACTTTGGAAAAGAAATATCTTTCTAATAAATGGTGCTGGGGGT
AGGCAGTCCGTGTGGCAAATGACTCAGCTGGCAAAATGCTTACTACCCCA
GCATGAGGGCCAGAGTCCCCACATCCACACAGAAAATGCCAGAGGCAATG
GCATTTGTCTCTGATCTCAGTGTTGGGTGGGAGAGGTGGGAGAAGCTCTG
GGGCTCACGGGGCAGCTCCAGCTTCAGTGGGAGACTCTGACTCAAAAACC
AATGTGGAGGAGACACTGGATGTCAATCTTTGCCCTCCACACGTATGTGC
CCTGTGTGTACTATACATGCATATCACATGTACACCTGTGACACACCCAC
ACAAAGAAATTAAAATGACAAATGTAGCTGAAAAAGCTGGAAATCCCATT
GTAAAAGAAAGCAGATCTTTCTCTCTGTATTAAAAAAAATCCCCCCCAAT
TGTTTCTTTTGAACAGAATTTCTTTTGAACCCCGGGGCTTTTTAAAATAA
TACCGGAAATTAATATGTGCT

Query= MSMg01no366_j23.b1 MSMg01no366_j23.b1 CHROMAT_FILE:
MSMg01no366_j23.b1 PHD_FILE: MSMg01no366_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:31 2005
         (467 letters)



>mm_chr13_112132627_112133493
          Length = 867

 Score =  760 bits (393), Expect = 0.0
 Identities = 435/459 (94%), Gaps = 16/459 (3%)
 Strand = Plus / Plus

                                                                       
Query: 9   tctggcccagcttcctctatacagtgagttccaggctggcccaggctacctagtaagacc 68
           |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tctggcccagcttagtctatacagtgagttccaggctggcccaggctacctagtaagacc 284

                                                                       
Query: 69  cttatatctcaaggggggaaaaagttatgctctgatgtccacatacctcctttggcatga 128
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 cttatatctcaaggggagaaaaagttatgctctgatgtccacatacctcctttggcatga 344

                                                                       
Query: 129 gcttgcctacatgcatacacacacacacacacacacacacacacacacatcacatcacat 188
           |||||||||||||||||||||||||||||||||                |||||||||||
Sbjct: 345 gcttgcctacatgcatacacacacacacacaca----------------tcacatcacat 388

                                                                       
Query: 189 cacatcacatcacatcatatcacatcacatcacacacatttatatgcagtaaaaataaat 248
           ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 389 cacatcacatcacatcacatcacatcacatcacacacatttatatgcagtaataataaat 448

                                                                       
Query: 249 aaaacaagaagtctgaaatttggtattagaactgccttagacatctacataagtccttga 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aaaacaagaagtctgaaatttggtattagaactgccttagacatctacataagtccttga 508

                                                                       
Query: 309 gttaaagaattttcatgatttttttattgagattgattgatggatagatatatagaccag 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gttaaagaattttcatgatttttttattgagattgattgatggatagatatatagaccag 568

                                                                       
Query: 369 tgtacgtgggtagacatgtgcgtacatggatggacaaataggtatggaaattggaagggt 428
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tgtacgtgggtagacatgtgcatacatggatggacaaataggtatggaaattggaagggt 628

                                                  
Query: 429 accacatattaagttaaatttctaataactctactggtc 467
           | || ||||||||||||||||||||||||||||||||||
Sbjct: 629 atcatatattaagttaaatttctaataactctactggtc 667


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space:   391649
Effective search space used:   391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)