NCCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTATTTTTCTCAGGTTGAACTAAATATCTTTCTTCATAAGCCAA
AACCTAGTTAGTATTATTAATTTCATACAGATCAAGCGAACATACACACA
CACAAACTTCTACTTTTATCCATTCACTGTGGAAGGTTTATTATCAGATT
GTTTCTTTACCCTGTTACTGGAGGCATCCATGTATGTAAGTGTGTATGTA
TATATGTATATATGTATGTATGTATGCATGTCTGTCTGTCTGTCTGTCTG
TCTGTATGTATGTATGTGTAAGTCTGTCTGTATGTATGTATGTAAGTATG
TGTAAGTCAGTCTGTGTGTCTGTCTGTCTGTCTGTATTTCTTACAAGCTT
CAGAATCTCCTCTGAGAAATACTCTTAGAGTCACCCACAGAATTTTCCTC
TATTACAAATCCGCCTGTGCAAGCCAAACTATACTATGTATACTAATTTT
CTAANATGACACTAAAAAATAACTACCCAGTGAGAAAGCAAGCTGTCCGT
CAGTTACTATTCTGTGGATCAAACCCTGTAAACGCTTCATTTACCCAGAA
GTGCATACCCTCCGGTTTTCTAAATTGGATCCCCGATTATTCTATGCACG
TTTTTCTCTCTTGGAAAAACTACTCCCCATCCCTTCTGTTACAAAAGATC
ATTTCTTTTTTTTTCTCACCGCCTTTGTTTAGTTTATTCGAGCTCGCTAA
TCCCTCGAACCCTCTGCCACTCCTCCAAATCGCTAATTCTTTCCTAATAT

CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCTAACCAGGGTGGATACTTTGGTATT
AAAATGAGACATGGGTGACTTTCAGACATTCTGGGGTACCCCTGTGCCCA
TATCAGGGGCATAAGCCAGTTTGTTGTGATCTAAGCTGGAATTTTCAGCT
TTGCTCTTTGCCAACTTAACTTCCTCGTCTGCTGACTCTGCAGTCCTCTC
TCCCGGCCTTCTCTCCTTGCCTCCTTAGGAAGACCCAAGCCTCCTATGGG
TGAGATTTAACTTGCTTCCCACTCTCCTTAGAAGGTGCGTAAAGGTGAAC
TTTCTTACCATCTGCCCCTGGAACCCCATTGGCGAACAAGCCCAAGACCC
AGTTCAAGGATAGTGCCTGGAGTCCATAAGACTCTTGGCTCGTTAGTGAT
ACGAGTTAGAATTGCAGACCCACCATGTGCTTTAGTGGCCTTGGAGAAAG
TTGATGAGTCTCCCCTGCCATTCCGAGGAAAGTTAGTGAATTTTACACAG
GACCCAGTTACTTTCTGGGTGCCCTCCAGGGAAAAATCTGCCCTCCTTTT
CTTGCAGGGGGGAATAGTTCAGAAAAATAAAAGCTCCATTTCCCAAGAAA
CCCCCCCGCCCATTTTTTGTGGGCGGGGAAAAATAAAAAAAAAAAACGGG
AGAAACATTCTAACTTTTAAAGAAGTCCTTTCGTGAGAGTCTTCCCCTGC
TCTTGATAAAAATATTTTTTAAAGGTCTTCGGCAGTN

Query= MSMg01no367_e22.b1 MSMg01no367_e22.b1 CHROMAT_FILE:
MSMg01no367_e22.b1 PHD_FILE: MSMg01no367_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:25 2005
         (455 letters)



>mm_chr13_107760880_107761736
          Length = 857

 Score =  694 bits (359), Expect = 0.0
 Identities = 421/455 (92%), Gaps = 26/455 (5%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctatttttctcaggttgaactaaatatctttcttcataagccaaaacctagttag 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatttttcttaggttgaactaaatatctttcttcataagccaaaacctagttag 264

                                                                       
Query: 65  tattattaatttcatacagatcaagcgaacat--acacacacacaaacttctacttttat 122
           ||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||
Sbjct: 265 tattattaatttcatacagatcaagcgaacatacacacacacacaaacgtctacttttat 324

                                                                       
Query: 123 ccattcactgtggaaggtttattatcagattgtttctttaccctgttactggaggcatcc 182
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccattcactgtggaaggtttagtatcagattgtttctttaccctgttactggaggcatcc 384

                                                                       
Query: 183 atgtatgtaagtgtgtatgtatatatgtatatatgtatgtatgtatgcatgtctgtctgt 242
           ||||||||||||||||||||||||||||||            ||||||||||||||||||
Sbjct: 385 atgtatgtaagtgtgtatgtatatatgtat------------gtatgcatgtctgtctgt 432

                                                                       
Query: 243 ctgtctgtctgtctgtatgtatgtatgtgtaagtctgtctgtatgt------atgtatgt 296
           |||| |||  ||  |||||||||||||||||||||||||||| |||      ||||||||
Sbjct: 433 ctgtgtgt--gt--gtatgtatgtatgtgtaagtctgtctgtctgtctgtgtatgtatgt 488

                                                                       
Query: 297 aagtatgtgtaagtcagtctgtgtgtctgtctgtctgtctgtatttcttacaagcttcag 356
           | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 489 atgtatgtgtaagtcagtctgtgtgtctgtctgtctgtctatatttcttacaagcttcag 548

                                                                       
Query: 357 aatctcctct--gagaaatactcttagagtcacccacagaattttcctctattacaaatc 414
           ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aatctcctctctgagaaatactcttagagtcacccacagaattttcctctattacaaatc 608

                                              
Query: 415 cgcctgtgcaagccaaactatactatgtatactaa 449
           ||||||||||||||||||||||||| |||||||||
Sbjct: 609 cgcctgtgcaagccaaactatactacgtatactaa 643


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 857
Length adjustment: 10
Effective length of query: 445
Effective length of database: 847
Effective search space:   376915
Effective search space used:   376915
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no367_e22.g1 MSMg01no367_e22.g1 CHROMAT_FILE:
MSMg01no367_e22.g1 PHD_FILE: MSMg01no367_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:25 2005
         (386 letters)



>mm_chr13_107946941_107947726
          Length = 786

 Score =  716 bits (370), Expect = 0.0
 Identities = 382/386 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctaaccagggtggatactttggtattaaaatgagacatgggtgactttcagacattctg 60
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tctaaccagggtggatgctttggtattaaaatgagacatgggtgactttcagacattctg 527

                                                                       
Query: 61  gggtacccctgtgcccatatcaggggcataagccagtttgttgtgatctaagctggaatt 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 526 gggtacccctgtgcccatatcaggggcataagccagcttgttgtgatctaagctggaatt 467

                                                                       
Query: 121 ttcagctttgctctttgccaacttaacttcctcgtctgctgactctgcagtcctctctcc 180
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 466 ttcagctttgctctttgccaacttaacttccttgtctgctgactctgcagtcctctctcc 407

                                                                       
Query: 181 cggccttctctccttgcctccttaggaagacccaagcctcctatgggtgagatttaactt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cggccttctctccttgcctccttaggaagacccaagcctcctatgggtgagatttaactt 347

                                                                       
Query: 241 gcttcccactctccttagaaggtgcgtaaaggtgaactttcttaccatctgcccctggaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gcttcccactctccttagaaggtgcgtaaaggtgaactttcttaccatctgcccctggaa 287

                                                                       
Query: 301 ccccattggcgaacaagcccaagacccagttcaaggatagtgcctggagtccataagact 360
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 286 ccccattggcgaacaagcccaagacccagttcaaggatagtggctggagtccataagact 227

                                     
Query: 361 cttggctcgttagtgatacgagttag 386
           ||||||||||||||||||||||||||
Sbjct: 226 cttggctcgttagtgatacgagttag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space:   292929
Effective search space used:   292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)