Query= MSMg01no369_h09.b1 MSMg01no369_h09.b1 CHROMAT_FILE:
MSMg01no369_h09.b1 PHD_FILE: MSMg01no369_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:11 2005
(301 letters)
>mm_chr13_51945736_51946436
Length = 701
Score = 551 bits (285), Expect = e-161
Identities = 297/301 (98%)
Strand = Plus / Minus
Query: 1 atactgggacatgtcccccagctccaggtgtctgtcttgcttggcaaagactcatcagct 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 atactgggacatgtcccccagctccaggtgtctgtcttgtttggcaaagactcatcagct 442
Query: 61 ggatcatagactggaatgaaccggttgtatgtagcctttgaagtcactcactccaagggg 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggatcatagactggaatgaaccagttgtatgtagcctttgaagtcactcactccaagggg 382
Query: 121 tccgcaagagactgcccactgaaaagggaagtgacaaaagcagatacagtgtatgtgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccgcaagagactgcccactgaaaagggaagtgacaaaagcagatacagtgtatgtgtgc 322
Query: 181 ttgtgcgcctgcaagatgtaaaccagaggcaaaccccaggtctgtccccactgggctaca 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtgcacctgcaagatgtaaaccagaggcaaaccccaggtctgtccccactgggctaca 262
Query: 241 atgtctcttgtttagtttttgcattgggcaactttcctccaaatggatttataactttta 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtctcttggttagtttttgcattgggcaactttcctccaaatggatttataactttta 202
Query: 301 t 301
|
Sbjct: 201 t 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 701
Length adjustment: 9
Effective length of query: 292
Effective length of database: 692
Effective search space: 202064
Effective search space used: 202064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_h09.g1 MSMg01no369_h09.g1 CHROMAT_FILE:
MSMg01no369_h09.g1 PHD_FILE: MSMg01no369_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:11 2005
(468 letters)
>mm_chr13_51856058_51856925
Length = 868
Score = 835 bits (432), Expect = 0.0
Identities = 456/468 (97%), Gaps = 7/468 (1%)
Strand = Plus / Plus
Query: 1 aaggccagcctggtctacacagtgagttctaggaccgccagggctacatagtgagaccct 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 aaggccagcctggtctacacagtgagttctaggaccgacagggctacatagtgagaccct 260
Query: 61 gtcttaaaaacaaaataaaacaaacaaaacacaagaaagctacagaactgtgggggaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcttaaaaacaaaataaaacaaacaaaacacaagaaagctacagaactgtgggggaact 320
Query: 121 agccagagcacagaaaagacagaattgtaaagcttgggcagcttcaaaagtgcaggaaga 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccggagcacagaaaagacagaattgtaaagcttgggcagcttcaaaagtgcaggaaga 380
Query: 181 ctcaaacctctttaactccatactctgtgtgtccccttaccacatacacaggcaagagca 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcaaacctctttacctccatactctgtgtgtccccttaccacatacacaggcaagagca 440
Query: 241 tggctctaaggacagaactgagaactgcaggtggggtttactttgtaacctgccaccaag 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 tggctctaaggacagaactg-------caggtggggtttactttgtaacctgccaccaag 493
Query: 301 caaggcctgtccctaatcctgatatctgccctgtcgtatgctcagaattcctaacagaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 caaggcctgtccctaatcctgatatctgccctgtcgtatgctcagaattcctaacagaat 553
Query: 361 actgagggatcgtagggacacccaagcaccccacaaagcttgttagccaggcctcccaga 420
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 554 actgagggatcctagggacacccaagcaccccccaaagcttgttagccaggcctcccaga 613
Query: 421 accttctggctgcagccttccctgcctggacacaccagcttctcccag 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 accttctggctgcagccttccctgcctggacacaccagcttctcccag 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
