Query= MSMg01no369_l01.b1 MSMg01no369_l01.b1 CHROMAT_FILE:
MSMg01no369_l01.b1 PHD_FILE: MSMg01no369_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:29 2005
(302 letters)
>mm_chr13_113135604_113136305
Length = 702
Score = 555 bits (287), Expect = e-162
Identities = 296/299 (98%)
Strand = Plus / Minus
Query: 4 ggaattcactgtgaaaatgtggttgtaaattaaactgcagttatgcaaggctagcaactg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ggaattcactgtgaaaatgtggttgtaaattaaactgcagttatgcaaggctagcaactg 344
Query: 64 tgtcccacttggacttgctacattgtaaacgtttttcttttaaaacaataaaacatccaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tgtcccacttggacttgctacattgtaaacgtttttcttttaaaacaataaaacatccaa 284
Query: 124 gggtaactcctacattttttgataaaggagtaaggcagtaagaatgttactttgttttaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gggtaactcctacattttttgataaaggagtaaggcagtaagaatgttactttgttttaa 224
Query: 184 aagcatttattagtttattttgtatgtgtgtttgtgccagagcacatgttgaagtcagag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 aagcatttattagtttattttgtatgtgtgtttgtgccagagcacatgttgaagtcagag 164
Query: 244 gacagcttgtagctttgggttcttgctttccccagatagaactcaggctgcctggcttg 302
||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||
Sbjct: 163 gacagcttgtagctttgggttctcgctttctccggatagaactcaggctgcctggcttg 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_l01.g1 MSMg01no369_l01.g1 CHROMAT_FILE:
MSMg01no369_l01.g1 PHD_FILE: MSMg01no369_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:29 2005
(246 letters)
>mm_chr13_112949119_112949766
Length = 648
Score = 453 bits (234), Expect = e-132
Identities = 244/248 (98%), Gaps = 2/248 (0%)
Strand = Plus / Plus
Query: 1 attcccctaagcttctaatacctatacatccaggacaaatttcaaaagcgttttaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 attcccctaagcttctaatacctatacatccaggacaaatttcaaaagcattttaaacaa 260
Query: 61 gaaattatatgaaagtgaacaggtacaaaaatacctatgggattatctggaaaaaaaa-- 118
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 gaaattatatgaaagtgaacaggtacaaaaatacctatgggattatctgaaaaaaaaaaa 320
Query: 119 cagttcaaaagctgcattctgttgcacaaggtgtgctcgaatatgtgtatgtgtgtgtgt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagttcaaaagctgcattctgttgcacaaggtgtgctcgaatatgtgtatgtgtgtgtgt 380
Query: 179 atgtgtgcatgcatgattgacgtttaatacatgtatatagtatgtttgatccagcccttc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtgtgcatgcatgattgacgtttaatacatgtatatagtatgtttgatccagcccttc 440
Query: 239 tcctccaa 246
||||||||
Sbjct: 441 tcctccaa 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 648
Length adjustment: 9
Effective length of query: 237
Effective length of database: 639
Effective search space: 151443
Effective search space used: 151443
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
