Query= MSMg01no370_g06.b1 MSMg01no370_g06.b1 CHROMAT_FILE:
MSMg01no370_g06.b1 PHD_FILE: MSMg01no370_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:26 2005
(288 letters)
>mm_chr13_38430940_38431627
Length = 688
Score = 505 bits (261), Expect = e-147
Identities = 279/285 (97%), Gaps = 1/285 (0%)
Strand = Plus / Minus
Query: 5 gaattcatttagatgtcag-tgagtagctccttttcaaaaataaaaaataaaaataaaat 63
||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gaattcatttagacgacagttgagtagctccttttcaaaaataaaaaataaaaataaaat 491
Query: 64 atcacgagaggaatgatagcttggagcccaacagaaacttcccaactgttggttcatttt 123
||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||
Sbjct: 490 atcacgagaggaatgatagcttgaagcccaacagaagctttccaactgttggttcatttt 431
Query: 124 ctcacgtgggtggagcacatacaggtaaagtcaattttcttaattataggagtgttttgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ctcacgtgggtggagcacatacaggtaaagtcaattttcttaattataggagtgttttgt 371
Query: 184 ccatgctttacacagtttgctgtatgcagtaaatactttttgatcagaaataaagcaata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ccatgctttacacagtttgctgtatgcagtaaatactttttgatcagaaataaagcaata 311
Query: 244 gcatcaaacaggtgtgagttgcaagggtcattggatgactctgag 288
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcatcaaacaggtgtgagttgcaagggtcattggatgactctgag 266
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no370_g06.g1 MSMg01no370_g06.g1 CHROMAT_FILE:
MSMg01no370_g06.g1 PHD_FILE: MSMg01no370_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:26 2005
(199 letters)
>mm_chr13_38229058_38229656
Length = 599
Score = 369 bits (191), Expect = e-107
Identities = 197/199 (98%)
Strand = Plus / Plus
Query: 1 agccaaaggacacagatcatctaagcagaaatagatttaatcagaaatatatttagcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agccaaaggacacagatcatctaagcagaaatagatttaatcagaaatatatttagcact 260
Query: 61 gtaaagggaaatacactctttaaacagaagtgaaatggtctggtccacagaaggaactgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaaagggaaatacactctttaaacagaagtgaaatggtctggtccacagaaggaactgg 320
Query: 121 tagcaagctgcatggaacattgctttgtatgtaatccctgtgtgtttagtttgtatgtgt 180
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 tagcaagctgcatggtacattgctttgtatgtaatccctgtgtgtttagtttgtgtgtgt 380
Query: 181 ggtgagtgtgtgttacatg 199
|||||||||||||||||||
Sbjct: 381 ggtgagtgtgtgttacatg 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
