TCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTGGCACACTTCTCTGTAATAAATTGTCAGTGACAAGTCATAGTT
TCATTAAAACATCACTGAGTACATTTAAAAGAGCGATTTTATAATTTTGG
GTTAAGTTTTGTTGTTGTTCTTTTTTTTTTTGAGACTATTTTTTATTATG
ATGACCATGACTGAAATTTGCATTATTTGTAATTATGTGAATTCCTGAGA
AAAAATATATAACCGTCTATGTTGATTTCATTAATGATCCAGAAAATGTA
GAGCTGGCTCAGTGGATAAAAGAGGTATTGTGTAAACATGAAAATAAGAG
TTTGGATCTGTATAAAATTGAAGAAGAGAATACTTGGAAGTTTGAAATCC
TAGCACTTAGGAGAGAGAGATGGAGATTTCCAGGGACAGGCTGGCTGGAC
TAGCCTCAGTCAGGAATTCCCCGTTTGCTAAATAACATGGACAGCTATCT
CAGAAGACACCCATAATTCCAGTCTGGCCTCCCCAGGCATGTGCCCCCCC
CTGCCATGCCCCTCCCCTCCCTGCACCCCGTTTCTAACACCCCCTCTAGA
GTATAACTCTCTTCCTACCCCCCTCCCTTTTACGAGCTCTCCACTCTATT
CCCCCCTTTCTTTCACCCCTTCTTCCACCTTTCTTCCCCCACTCTTTACT
CTTCCTCCTCCTCCCCCCCTCCTCCTTCCTTTTTCCCTATT

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGCTGTTCTGGCTGAAAGCTTCTCTCT
ACGCTGACTGATTTAAAGTGGCTTCTTTCAGTTTCTGACTGAATTGCTCT
GCTTGACCTCATACTGCCTTTAAAGATGCCACCTTTGGCAATATGACGTA
ATGTTCTGGCTCCTTTTCAGTCTCTGTGTTGCTCTGTCTTCACCTGTGTG
TAGCTTGTTCTCTCTGCAACCTGTCTTTGTACAACTTTTGTGGTAAAACT
GCCCTCTCTCTTCTTCTTTCTCTCTGCTGCTCTCTCTTAAGTAGCCTTCC
TTTTCTCTCTGTTTTCCTGAGAGTCGTGCATATCTTATTCTGTCAAATCT
TTCTCTGGTTCATCACTTTATCTGCTTCTCAACTAGACATCACTTTCAAA
CATGGGTGCTTCCCTCTACAAACTAGCTTGATGTTCACTGTTTAAAATTA
AAGGTGTATGCTTAAAGGTGTGTATATTCCAGACCCAAGGTTTAAAGTAT
GTTATTAAGGGTGTGTCTTGTCTTTCTAAAAAATATCCCCTTTTACTGGA
ATAAAAACTCCTCTTCCCCCTTTCCCGGATAACCATCTACCAAAAACTAC
GTTATCTTCCTATCCTTGTTTTTTTTTCCCCCTATATGCTCATATTTTCT
CTCCTTCCTCCTCCTTCTTCACTTTATCCTTACCTCTTCCACAAAATCTT
TCTCTTCCCTCCGTCCCTTTTTTATCCCTCCTTTCTN

Query= MSMg01no370_g12.b1 MSMg01no370_g12.b1 CHROMAT_FILE:
MSMg01no370_g12.b1 PHD_FILE: MSMg01no370_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:27 2005
         (430 letters)



>mm_chr13_5601310_5602144
          Length = 835

 Score =  737 bits (381), Expect = 0.0
 Identities = 417/431 (96%), Gaps = 5/431 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttggcacacttctctgtaataaattgtcagtgacaagtcatagtttcattaaaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttggcacacttctctgtaataaattgtcagtgacaagtcatagtttcattaaaa 264

                                                                       
Query: 65  catcactgagtacatttaaaagagcgattttataattttgggttaagttttgttgttgtt 124
           ||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 265 catcactgactacatttaaaagagcaattttataattttgggttaggttttgttgttgtt 324

                                                                       
Query: 125 c----tttttttttttgagactattttttattatgatgaccatgactgaaatttgcatta 180
           |    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 ctttttttttttttttgagactatttcttattatgatgaccatgactgaaatttgcatta 384

                                                                       
Query: 181 tttgtaattatgtgaattcctgag-aaaaaatatataaccgtctatgttgatttcattaa 239
           |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 385 tttgtaattatgtgaattcctgagaaaaaaatatataacagtctatgttgatttcattaa 444

                                                                       
Query: 240 tgatccagaaaatgtagagctggctcagtggataaaagaggtattgtgtaaacatgaaaa 299
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 445 tgatccagaaaatgtagagctggctcagtggataaaagaggtattgtataaacatgaaaa 504

                                                                       
Query: 300 taagagtttggatctgtataaaattgaagaagagaatacttggaagtttgaaatcctagc 359
           |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 505 taagagtttggatctgtataaaattgaagaagagaatacttggaagtttgaagtcctaac 564

                                                                       
Query: 360 acttaggagagagagatggagatttccagggacaggctggctggactagcctcagtcagg 419
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 565 acttaggagagagagatggagatttccagggataggctggctggactagcctcagtcagg 624

                      
Query: 420 aattccccgtt 430
           |||||||||||
Sbjct: 625 aattccccgtt 635


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 835
Length adjustment: 9
Effective length of query: 421
Effective length of database: 826
Effective search space:   347746
Effective search space used:   347746
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)