TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTCGCGTTGTCAGTTCCTGAGATATTGTAGGGCCATTGACAGTTTAGTT
TTTAAGTTTCACAGATCTCTCCCCGTAGAATCTCTGTTCCTGGACAGCAC
TTAAATCTCCTTGGGGTTCCCAAAGGAGGACCTGAACCTCATACGGACTT
CATATTCCTCTCACCTCCTACATCTGGCTCTATTAGGAGTTTCCACAAGT
TTCTGAACATCTGCGCAACAGCACTGTCCATGTCTTGGCAGGCGTCTGGT
TCCACACAGGTACTGAGTACTTGACAGCAGTTTTCTAGGGAAAAAAAAAA
ATGAGGTGCTTCTTATCTGTTTGCTAATTCCTTGCACACATCACAAGACT
TTTCTGTAAATTCCCATCGGTCTTGACAAAGTTATCTTGTAGACTTGTGT
AGTGATTTTGATGGCTGTGCAGGCCTGTTTGTCTTGTTCAGAAAGAAATT
AATAATCCCGTGATGGCACCTACTTTACCACCAAACTTCTTAAACTCTCC
TAATATACTAATCAGCAAGTCAGTGAAATATTTTTTTTTTCTGGATAAAG
ACCAGCCTGGTGAAATGGATTAAACATTCACAGGGCATTGCATAATTCAG
CATGCCAGTGCGGGGTATGCGATTTGCATTAATAACTCCCGCTGGAAGCT
GCTGCTCACCGGTTTCTCTCATTAGGTCCAAGGTGGAAG

AAAAACAAATAAAAATACACAAACCACATTTATATAAAATAAAACAAAAA
CTCAAATATATTTTATTAAAAAAACTATATTTCTAATATATATAATAACT
CATAACCATCTTTTTTATTCCCACCTCTTCCATATTTTTATTTTTCGCCA
GCCCAATTTAATCCCTTTTTTGGTATTCTTACGTATCTTTGTATCCCCAC
TCTCCCATCTGCAATACCCCATTTCATAACAAACAACAATATATCCAACA
ATATCCATAATACATACATCACATATCCCTATTTCCCTCCCCTTTTTTTC
TATCTTACCATATCTTACCCTCCTTTCCACACATACTTTATAATACAATA
AAAATTCAATAAACAAACCACATAACTCTCCACATTAAAAATAAAAAAAT
ATTAATAAACCTTACCTTATACAACAAAAATTTTCATATACNACCCCCTT
TTAATTCACCCCCTTTTACTTAATTTTCCCTTTTTTCCCCCCCNCCCCCC
TTTTCCCCCAAAAAATTATATACACCCCTCCCNTCCATACCTAATAATAA
AACATAAACCCCACTTTAAATTTANTNNNNNNNNNNNNNNNNNNNNNNNT
TAAAANNAGNATACGCCAAATTCCTAACTGNAGCCTTAAGTATCATAGNA
ACGATAATACTATTTGNNNNNNGTTCCCGTNTTAGTGGNNNNGNTCCNNA
TCNNNNTCNNGATNNNNGCTNAGNNTNCNGTNNNNANNNNTANGCTNNNT
GCNAANGCCTACCCCCAGTCTTCNAATNGNNTTTNCGAAANNCTCNNGCA
TCTGC

Query= MSMg01no372_n01.b1 MSMg01no372_n01.b1 CHROMAT_FILE:
MSMg01no372_n01.b1 PHD_FILE: MSMg01no372_n01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:39 2005
         (560 letters)



>mm_chr13_44440531_44441487
          Length = 957

 Score = 1033 bits (534), Expect = 0.0
 Identities = 550/556 (98%), Gaps = 3/556 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttcgcgttgtcagttcctgagatattgtagggccattgacagtttagtttttaa 64
           |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gaattcttcgcgctgtgagttcctgagatattgtagggccattgacagtttagtttttaa 698

                                                                       
Query: 65  gtttcacagatctctccccgtagaatctctgttcctggacagcacttaaatctccttggg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gtttcacagatctctccccgtagaatctctgttcctggacagcacttaaatctccttggg 638

                                                                       
Query: 125 gttcccaaaggaggacctgaacctcatacggacttcatattcctctcacctcctacatct 184
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gttcccgaaggaggacctgaacctcatacggacttcatattcctctcacctcctacatct 578

                                                                       
Query: 185 ggctctattaggagtttccacaagtttctgaacatctgcgcaacagcactgtccatgtct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ggctctattaggagtttccacaagtttctgaacatctgcgcaacagcactgtccatgtct 518

                                                                       
Query: 245 tggcaggcgtctggttccacacaggtactgagtacttgacagcagttttctagggaaaaa 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 517 tggcaggcgtctggttccacacaggtactgagtacttgacagcagttttctaggg--aaa 460

                                                                       
Query: 305 aaaaaatgaggtgcttcttatctgtttgctaattccttgcacacatcacaagacttttct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aaaaaatgaggtgcttcttatctgtttgctaattccttgcacacatcacaagacttttct 400

                                                                       
Query: 365 gtaaattcccatcggtcttgacaaagttatcttgtagacttgtgtagtgattttgatggc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gtaaattcccatcggtcttgacaaagttatcttgtagacttgtgtagtgattttgatggc 340

                                                                       
Query: 425 tgtgcaggcctgtttgtcttgttcagaaagaaattaataatcccgtgatggcacctactt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tgtgcaggcctgtttgtcttgttcagaaagaaattaataatcccgtgatggcacctactt 280

                                                                       
Query: 485 taccaccaaacttcttaaactctcctaatatactaatcagcaagtcagtgaaatattttt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 279 taccaccaaacttcttaaactctcctaatatactaatcagcaagtcagtgaaata-tttt 221

                           
Query: 545 tttttctggataaaga 560
           ||||||||||||||||
Sbjct: 220 tttttctggataaaga 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 957
Length adjustment: 10
Effective length of query: 550
Effective length of database: 947
Effective search space:   520850
Effective search space used:   520850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)