Query= MSMg01no373_c03.b1 MSMg01no373_c03.b1 CHROMAT_FILE:
MSMg01no373_c03.b1 PHD_FILE: MSMg01no373_c03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:02 2005
(630 letters)
>mm_chr13_100807805_100808830
Length = 1026
Score = 1154 bits (597), Expect = 0.0
Identities = 619/629 (98%), Gaps = 7/629 (1%)
Strand = Plus / Plus
Query: 4 ggaattctgtggctggcgaaagctaaggtacaacataaaaggaatggcagggtctcttcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgtggctggcgaaagctaaggtacaacataaaaggaatggcagggtctcttcc 263
Query: 64 ctcctttacctcgcaggtaggattgcttcttgagaaacactggccccttcaacatcaccc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcctttacctcgcaggtaggattgcttcttgagaaacactggccccttcaacatcaccc 323
Query: 124 acacactgcgactgctcctcttccttagtttctgctgctgtgactggtgcatggctttta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acacactgcgactgctcctcttccttagtttctgctgctgtgactggtgcatggctttta 383
Query: 184 tcttctaattctactgctttggaatcatctccttcagtttc-ttttttaaaaaaaaaagg 242
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 384 tcttctaattctactgctttggaatcatctccttcagtttctttttttaaaaaaaagagg 443
Query: 243 gggggggggaaatacacaatatatagttcaaaatagtacagctaaatctctacattaaaa 302
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gggggg-----atacacaatatatagttcaaaatagtacagctaaatctctacattaaaa 498
Query: 303 acatattctctctaaagaacagatttggttacccctccaagattctcatactcaaaaatc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 acatattctctctaaagaacagatttggttacccctccaagattctcatactcaaaaatc 558
Query: 363 agctaattcacaaggcaaaagaatggggtttgccaagatttttgaaaagtaaaacatgat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agctaattcacaaggcaaaagaatggggtttgccaagatttttgaaaagtaaaacatgat 618
Query: 423 taatgaaaactgcactgcacatatttcatttttgggtgacaaagcaattgcatccctatt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 taatgaaaactgcactgcacatatttcatttttgggtgacaaagcaattgcatccctatt 678
Query: 483 tgtggtaacagttctatagtatcataattaaaagtagtgctataattaagggctggcaaa 542
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tgtggtaacagttctacagtatcataattaaaagtagtgctataattaagggctggcaaa 738
Query: 543 cggctcatcagctagctgacagtgacctgtacaatcctcaggacccacacatgacaggag 602
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cggctcatcagctagctaacagtgacctgtacaatcctcaggacccacacatgacaggag 798
Query: 603 aaaactgactcccacaagt-atcatctga 630
||||||||||||||||||| |||||||||
Sbjct: 799 aaaactgactcccacaagttatcatctga 827
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1026
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1016
Effective search space: 629920
Effective search space used: 629920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_c03.g1 MSMg01no373_c03.g1 CHROMAT_FILE:
MSMg01no373_c03.g1 PHD_FILE: MSMg01no373_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:02 2005
(246 letters)
>mm_chr13_100965457_100966102
Length = 646
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%)
Strand = Plus / Minus
Query: 1 agaacagtgggcaggagtagcactttccttgtggaagccactgcaggtggtggtagggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agaacagtgggcaggagtagcactttccttgtggaagccactgcaggtggtggtagggtt 384
Query: 61 gttgggggagcttctgagaagtatatgttctccacaaggggataagtattcctccctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gttgggggagcttctgagaagtatatgttctccacaaggggataagtattcctccctgct 324
Query: 121 ctttagtttgtcttcaggtaaatcaggtgtaggctcctggccaggtgactcataggtcta 180
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 323 ctttagtttgtcttcaggtaaatcaggtgtaggcccctggccaggtgactcataggccta 264
Query: 181 gctagattaactctaaaaggagaagacagtaataatcgacttcacaatttttggaacaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gctagattaactctaaaaggagaagacagtaataatcgacttcacaatttttggaacaga 204
Query: 241 taa 243
|||
Sbjct: 203 taa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
