Query= MSMg01no373_i09.b1 MSMg01no373_i09.b1 CHROMAT_FILE:
MSMg01no373_i09.b1 PHD_FILE: MSMg01no373_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:30 2005
(555 letters)
>mm_chr13_67616835_67617789
Length = 955
Score = 1021 bits (528), Expect = 0.0
Identities = 528/528 (100%)
Strand = Plus / Minus
Query: 28 aaccttacaagtgtgaagactgtgggaagggattctcgactcactcataccttactctgc 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 aaccttacaagtgtgaagactgtgggaagggattctcgactcactcataccttactctgc 892
Query: 88 acaaattacttcataccggagagaaacctttcaaatgggaagaatgtggtgaggttttct 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 acaaattacttcataccggagagaaacctttcaaatgggaagaatgtggtgaggttttct 832
Query: 148 atacctgctgaagacttactaaacatcaggaaattcacattggcgaaaaccctacaaagg 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 atacctgctgaagacttactaaacatcaggaaattcacattggcgaaaaccctacaaagg 772
Query: 208 taaagaatgtgtcaaaactctttactgtacttcagactttaaataataccataaaaactc 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 taaagaatgtgtcaaaactctttactgtacttcagactttaaataataccataaaaactc 712
Query: 268 atactgaagagaaaccatactttaattagggcttcgttagatacaaggtacgtcctactg 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 atactgaagagaaaccatactttaattagggcttcgttagatacaaggtacgtcctactg 652
Query: 328 tagagaaactttacagatgtggagaatgtggacaaatattttaccgtacttcacaacttt 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tagagaaactttacagatgtggagaatgtggacaaatattttaccgtacttcacaacttt 592
Query: 388 aacagccagcaaaagggctcattctcagaagaatcccttcaagtgtgaagtatgggacaa 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 aacagccagcaaaagggctcattctcagaagaatcccttcaagtgtgaagtatgggacaa 532
Query: 448 ggtattatgtgctaccttgagctttctgtctaccagaacatgtatcctggagagaaactc 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ggtattatgtgctaccttgagctttctgtctaccagaacatgtatcctggagagaaactc 472
Query: 508 tgcaagtgtgaaaaatttggaaagttttttaactcattcctccctgat 555
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tgcaagtgtgaaaaatttggaaagttttttaactcattcctccctgat 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_i09.g1 MSMg01no373_i09.g1 CHROMAT_FILE:
MSMg01no373_i09.g1 PHD_FILE: MSMg01no373_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:30 2005
(537 letters)
>mm_chr13_67459833_67460769
Length = 937
Score = 1015 bits (525), Expect = 0.0
Identities = 534/537 (99%), Gaps = 1/537 (0%)
Strand = Plus / Plus
Query: 1 ttctgcaggttcagggttagctgtcttaccttgggttggttttctcttcagggacagtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttctgcaggttcagggttagctgtcttaccttgggttggttttctcttcagggacagtca 261
Query: 61 ttacctcactctatagtggaccacacagcttgtgacaatagataaaaaacctctcagaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttacctcactctatagtggaccacacagcttgtgacaatagataaaaaacctctcagaat 321
Query: 121 ccactgacaaggcagaacatgaaattctatcagtccaaaagctaaaacctcatcagatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ccactgacaaggcagaacatgaaattctatcagtccaaaagctaaaacctcatcagatgg 381
Query: 181 tatcttaggtaaatagaatatctccgatgactctatgagacacacaccaatgtattttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tatcttaggtaaatagaatatctccgatgactctatgagacacacaccaatgtattttaa 441
Query: 241 attttccttgttttaatgacattctctgttctgtaaaaccatgaaactgccttgtgttga 300
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 attttccttggtt-aatgacattctctgttctgtaaaaccatgaaactgccttgtgttga 500
Query: 301 agcacagaatttggattaacctaagtctgtattctcagataatggccactcaaaaggctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcacagaatttggattaacctaagtctgtattctcagataatggccactcaaaaggctg 560
Query: 361 actaaactgtctcttaaccctttaagaggagaactgcattttgcatggacaggaacctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actaaactgtctcttaaccctttaagaggagaactgcattttgcatggacaggaacctat 620
Query: 421 gtgaaaattataagaccccaagtgtgccagagctttctgaatttttcttacaaccacagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgaaaattataagaccccaagtgtgccagagctttctgaatttttcttacaaccacagg 680
Query: 481 aaaacatgaggaaatcattctagaaatgtccagtgagcagcagcaaagctgggtgcc 537
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 681 aaaacatgaggaaatcattctagaaatgtccagtgagcagcagtaaagctgggtgcc 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
