Query= MSMg01no374_g15.b1 MSMg01no374_g15.b1 CHROMAT_FILE:
MSMg01no374_g15.b1 PHD_FILE: MSMg01no374_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:38 2005
(558 letters)
>mm_chr13_97299415_97300367
Length = 953
Score = 949 bits (491), Expect = 0.0
Identities = 536/553 (96%), Gaps = 5/553 (0%)
Strand = Plus / Minus
Query: 6 gaattctttcctttgccctgcacacgtctgttttatttcgttttacagaagcaggttgtc 65
||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 753 gaattctttcctttgagctgcacacgtctgttttatttcgttttgcagaag-aggttgtc 695
Query: 66 ctttagtctgtgcactgggaattgtgcgtttccatttgcttcgtagtgaaccagactgta 125
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 694 ctttagtctgtgcactgggaattgtgcgtttccgtttgcttcgtagtgaaccagactgta 635
Query: 126 tcgtgtcatttcaggctataaaaatgttgaccgtcattcttttcaaggttgcagttgcat 185
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 634 tcgtgtcatttcaggctataaaaatgttgaccatcgttcttttcaaggttgcagttgcat 575
Query: 186 ccattcatctggtttattctacttgcaatgaggcttagcaatcatagcataaatactaat 245
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 574 ccattcatctggtttattctacttgtgatgaggcttagcaatcatagcataaatactaat 515
Query: 246 ttgagtacaaacaaaacccacctgtgttctctgtgagctttcagttttccttggggatgc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ttgagtacaaacaaaacccacctgtgttctctgtgagctttcagttttccttggggatgc 455
Query: 306 ttgcctgggcccttttgtatgtagcctttacctagagagaagtaagacttatagtaaacc 365
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttgcctgggcccttt----tgtagcctttacctagagagaagtaagacttatagtaaacc 399
Query: 366 gcacagctctggaagtttgacttgggattcataacagcagcaagaataactaactgagag 425
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 398 gcacagctctggaagtttggcttaggattcataacagcagcaagaataactaactgagag 339
Query: 426 cttatcacatattgggtaccatgctgagcccttaacagtatctgctgatcaaactaagcc 485
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 338 cttatcacatattgggtaccatgctgagcccttaacagtatctgctgatcaaacgaagcc 279
Query: 486 atttgaaataaggctcactacttcctgcaaaaatagggaagtcattatacttgtaatgtt 545
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 acttgaaataaggctcactacttcctgcaaaaatagggaagtcattatacttgtaatgtt 219
Query: 546 atatgaacatctt 558
|||||||||||||
Sbjct: 218 atatgaacatctt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 953
Length adjustment: 10
Effective length of query: 548
Effective length of database: 943
Effective search space: 516764
Effective search space used: 516764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_g15.g1 MSMg01no374_g15.g1 CHROMAT_FILE:
MSMg01no374_g15.g1 PHD_FILE: MSMg01no374_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:39 2005
(535 letters)
>mm_chr13_97148686_97149619
Length = 934
Score = 1019 bits (527), Expect = 0.0
Identities = 533/535 (99%), Gaps = 1/535 (0%)
Strand = Plus / Plus
Query: 1 attctctgagcctgttcaagccaagatacccatcttccctggcatccacaccagaaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctctgagcctgttcaagccaagatacccatcttccctggcatccacaccagaaccac 260
Query: 61 accactgcttcccatcctctacaacgtgtacataagtgattgtgagacttctccatctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accactgcttcccatcctctacaacgtgtacataagtgattgtgagacttctccatctcc 320
Query: 121 ataaacaagtgagccagttctctgtagcaacacatgcaggcacatatgcacacatacatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataaacaagtgagccagttctctgtagcaacacatgcaggcacatatgcacacatacatg 380
Query: 181 ttctgattctctagaacaatagccttgttctgagactgctgggaaccaaagaaaagaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctgattctctagaacaatagccttgttctgagactgctgggaaccaaagaaaagaagc 440
Query: 241 agagattactacaagaggttactacaagcttgaaactgcaaactacaaaacctaaaacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agagattactacaagaggttactacaagcttgaaactgcaaactacaaaacctaaaacat 500
Query: 301 ctacaaagcagaagaaagtttgacacatttttttctttttcttttcattaatttatttat 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 ctacaaagcagaagaaagtttgacacatttttt-ctttttcttttcattaatttatttat 559
Query: 361 tcaatttgcatcctgatcatagccctctccctcctctcctcccagccccaccctcacatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcaatttgcatcctgatcatagccctctccctcctctcctcccagccccaccctcacatc 619
Query: 421 ccccctcctccagctccttctccttcctctgataagggaaggcccaccatgggtatcaac 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccccctcctccagctccttctccctcctctgataagggaaggcccaccatgggtatcaac 679
Query: 481 ccaccctggcacatcaagttgcaccaggactaggctcattctctcccactgatgc 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ccaccctggcacatcaagttgcaccaggactaggctcattctctcccactgatgc 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 934
Length adjustment: 10
Effective length of query: 525
Effective length of database: 924
Effective search space: 485100
Effective search space used: 485100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
