Query= MSMg01no375_g10.b1 MSMg01no375_g10.b1 CHROMAT_FILE:
MSMg01no375_g10.b1 PHD_FILE: MSMg01no375_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:59 2005
(515 letters)
>mm_chr13_37583051_37583965
Length = 915
Score = 853 bits (441), Expect = 0.0
Identities = 488/515 (94%), Gaps = 18/515 (3%)
Strand = Plus / Plus
Query: 1 aaggcactttttggccccatagtagtagtaagtactacttcatctctcaactctaaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggcactttttggccccatagtagtagtaagtactacttcatctctcaactctaaaaac 260
Query: 61 taaggactgatgtaggacacaggtagagaatgggaatagattatacatgtttaccaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaggactgatgtaggacacaggtagagaatgggaatagattatacatgtttaccaatgc 320
Query: 121 cctgggaacatggcatggagtggcagaaggtgacaccaaccatagagagtgcatcaacag 180
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgggaacatggcatggagtggcagaaggtgacaccaaccat----------------- 363
Query: 181 cagaggagaattgcacagcccatccgaatattctgcctctagctccttagtcaataacct 240
||||||||| || ||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 364 -agaggagaactgtacagcccatccgaatgttctgcctctagctcgttagtcaataacct 422
Query: 241 aatcccatcttcactttctataatgtgactcacacatttgtactacagccctgacctccc 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aatcccatcttcactttctgtaatgtgactcacacatttgtactacagccctgacctccc 482
Query: 301 tccattgtttaaaatgtcctcgaggatgtctgtaaggactgctatcccaacatatccagg 360
||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 483 tccgttgtttaaaatgtcctcgcggatgtctgtaaagactgctatcccaacatatccagg 542
Query: 361 cccaagccttttctcttccccaacaaattctatccttctccaggatttcctgccttagtt 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 543 cccaagccttttctcttccccaaaaaattctatccttctccaggatttcctgccttagtt 602
Query: 421 tctctactgcttacatcagaacctccagaggtagactaacatctgaccaaccatgttcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tctctactgcttacatcagaacctccagaggtagactaacatctgaccaaccatgttcca 662
Query: 481 tgtcccagaatgcacctcgtccatgcccctgtcat 515
|||||||||||||||||||||||||||||||||||
Sbjct: 663 tgtcccagaatgcacctcgtccatgcccctgtcat 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_g10.g1 MSMg01no375_g10.g1 CHROMAT_FILE:
MSMg01no375_g10.g1 PHD_FILE: MSMg01no375_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:59 2005
(417 letters)
>mm_chr13_37773390_37774210
Length = 821
Score = 596 bits (308), Expect = e-174
Identities = 337/354 (95%), Gaps = 14/354 (3%)
Strand = Plus / Minus
Query: 70 gataggattcagctgaaatcacagaagaaataagctcctgttaaaggtttctgttctagc 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gataggattcagctgaaatcacagaagaaataagctcctgttaaaggtttctgttctagc 762
Query: 130 tgggcgtggtggtgcacgcctttaattccggcactcgggaggcagaggcaggtaggtttc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tgggcgtggtggtgcacgcctttaattccggcactcgggaggcagaggcaggtaggtttc 702
Query: 190 tgagttcgaggccagcctggtccacagagtgggttccaggacagccagggctattttt-- 247
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 701 tgagttcgaggccagcctggtccacagagtgagttccaggacagccagggcta-----ca 647
Query: 248 ---ataaaccctgtcttgaaaaaacaaattgttctagtaaagccttttggtactgtaatc 304
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 cagagaaaccctgtcttgaaaaaacaaattgttctagtaaagccttttggtactgtaatc 587
Query: 305 aaatactagagacaagcagcttaaaaagaacctttttttt----ggggtggggttcttag 360
|||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 586 aaatactagagacaagcagcttaaaaagaacctttttttttttggggggggggttcttag 527
Query: 361 tttagggaatttcagtccataatcagttggtccatttctcgtgggcttgcacta 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tttagggaatttcagtccataatcagttggtccatttctcgtgggcttgcacta 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 821
Length adjustment: 9
Effective length of query: 408
Effective length of database: 812
Effective search space: 331296
Effective search space used: 331296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
