Query= MSMg01no376_b14.b1 MSMg01no376_b14.b1 CHROMAT_FILE:
MSMg01no376_b14.b1 PHD_FILE: MSMg01no376_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:54 2005
(522 letters)
>mm_chr13_31173703_31174624
Length = 922
Score = 990 bits (512), Expect = 0.0
Identities = 517/519 (99%)
Strand = Plus / Plus
Query: 4 ggaattcagaattaggaacaagtcagtaagtattaaagtttcagttttaaacccagttaa 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagaattaggaaaaagtcagtaagtattaaagtttcagttttaaacccagttaa 263
Query: 64 aagtggagcgatgcttaaatagcaatagctgtgataaacaactgaaggaaagtttcacca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aagtggagcgatgcttaaatagcaatagctgtgataaacaactgaaggaaagtttcacca 323
Query: 124 agcgcagaccttagaggattttgttgttactaatatatagtttgtgttttttactttaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agcgcagaccttagaggattttgttgttactaatatatagtttgtgttttttactttaat 383
Query: 184 gtctgttttatttggttttagtactacaagttttagtaaaattttgaccccttgtttatt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtctgttttatttggttttagtactacaagttttagtaaaattttgaccccttgtttatt 443
Query: 244 ttatttttaaagacagtaatgaagtcatgaaagggcggtcaggattttgtgtttttgtac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttatttttaaagacagtaatgaagtcatgaaagggcggtcaggattttgtgtttttgtac 503
Query: 304 aggaataaaatgaaaggcttttaatgtttccttgtgaaaaatgaaaagtattaagaaagc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aggaataaaatgaaaggcttttaatgtttccttgtgaaaaatgaaaagtattaagaaagc 563
Query: 364 atttggacagggttctaataggagcttggggaccagacttaaagtctataatttctagaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atttggacagggttctaataggagcttggggaccagacttaaagtctataatttctagaa 623
Query: 424 aaatagtaggacacttaaatgtagtaacataatttaaattttagttacatttgatattaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaatagtaggacacttaaatgtagtaacataatttaaattttagttacatttgatattaa 683
Query: 484 ttagtagtcgtgctctgtttcgagattnaaacgctccaa 522
||||||||||||||||||||||||||| |||||||||||
Sbjct: 684 ttagtagtcgtgctctgtttcgagattaaaacgctccaa 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_b14.g1 MSMg01no376_b14.g1 CHROMAT_FILE:
MSMg01no376_b14.g1 PHD_FILE: MSMg01no376_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:54 2005
(471 letters)
>mm_chr13_31230465_31231336
Length = 872
Score = 861 bits (445), Expect = 0.0
Identities = 461/471 (97%), Gaps = 8/471 (1%)
Strand = Plus / Minus
Query: 1 agatcctcctgcaggagatgccttggtggcagcgtttacgtagtggtgaccgctgctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 agatcctcctgcaggagatgccttggtggcagcgtttacgtagtggtgaccgctgctgtt 498
Query: 61 cctcctacatgccattcaatgttctgacgttttagattaaagtttagctgtagagctggg 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 497 cctcctacatgccattcaatgttctgatgttttagattaaagtttagctgtagagctggg 438
Query: 121 gagggtctgtctaaaagatcccccttgcaagtgggaggccctaagttcaacttgacagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gagggtctgtctaaaagatcccccttgcaagtgggaggccctaagttcaacttgacagaa 378
Query: 181 tgcactgatgtgggttgctgtcctggaggaaaatttttcatagctcacaggcttccccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tgcactgatgtgggttgctgtcctggaggaaaatttttcatagctcacaggcttccccct 318
Query: 241 gcttccacagaaactcctttcttccttgaaacacgactttgtggggaaccactggaattc 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 317 gcttccacagaaactcctttcttccttgaaacacggctttgtggggaaccactggaattc 258
Query: 301 agtgatactttgcctcaatctcttccatttgatgaggtttttttatttattttttcattg 360
|||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 257 agtgatactttgcctcaatctcttccatttgatgaggttttttt--------tttcattg 206
Query: 361 ttttcccccagtttatttacattattttgaggtttggaccttctctatcttggatttctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ttttcccccagtttatttacattattttgaggtttggaccttctctatcttggatttctg 146
Query: 421 tgatgacgcatgattttattttatttttttctgactgtcctgctttgtact 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tgatgacgcatgattttattttatttttttctgactgtcctgctttgtact 95
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 872
Length adjustment: 10
Effective length of query: 461
Effective length of database: 862
Effective search space: 397382
Effective search space used: 397382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
