Query= MSMg01no376_c20.b1 MSMg01no376_c20.b1 CHROMAT_FILE:
MSMg01no376_c20.b1 PHD_FILE: MSMg01no376_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:00 2005
(489 letters)
>mm_chr13_38510777_38511664
Length = 888
Score = 901 bits (466), Expect = 0.0
Identities = 481/486 (98%), Gaps = 1/486 (0%)
Strand = Plus / Plus
Query: 4 ggaattctctaacacttgaatcttaggctgttaactagttgacttgtttgtttgggtaaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctaacacttgaatcttaggctgttaactagttgacttgtttgtttgggtaaa 263
Query: 64 gtactgaagagtctaagacttggacttactgatgggaaaaaaaaatcaccctgaatttta 123
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 264 gtactgaagagtctaagacttggacttactgatgggaaaaaaaa-tcaccctgaatttta 322
Query: 124 acctaagagtgtgtcactgctgagtttattacttctgtagagtcataacatttgagggcc 183
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 323 acctaagagtgtgtcactgctgagtttattacttttgtagagtcataacatttgagggcc 382
Query: 184 aaagtccatgtatacctgtaggttaagtagttgtatatatccttgtcataagtcatggaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aaagtccatgtatacctgtaggttaagtagttgtatatatccttgtcataagtcatggaa 442
Query: 244 ttaaaccagttacaagaccagaagactctggaccactttccttactgaacatggtcaagt 303
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcaaaccagttacaagaccagaagactctggaccactttccttactgaacatggtcaagt 502
Query: 304 ccacaagaagcccaccacctcttctagtttgtgttggaaggctagtgctctttctggtat 363
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ccacgagaagcccaccacctcttctagtttgtgttggaaggctagtgctctttctggtat 562
Query: 364 agtgtgaatggttgtatccacaaacatcctacgttattgtcataaatgagcagggtgcac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agtgtgaatggttgtatccacaaacatcctacgttattgtcataaatgagcagggtgcac 622
Query: 424 taggactcattttttctattcctcaagccagtaacgttctccccctcacttgaaagtgct 483
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 623 taggactcattttttctattcctcaagccagtaacattctccccctcacttgaaagtgct 682
Query: 484 tcttag 489
||||||
Sbjct: 683 tcttag 688
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 888
Length adjustment: 10
Effective length of query: 479
Effective length of database: 878
Effective search space: 420562
Effective search space used: 420562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_c20.g1 MSMg01no376_c20.g1 CHROMAT_FILE:
MSMg01no376_c20.g1 PHD_FILE: MSMg01no376_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:01 2005
(275 letters)
>mm_chr13_38669492_38670166
Length = 675
Score = 516 bits (267), Expect = e-151
Identities = 273/275 (99%)
Strand = Plus / Minus
Query: 1 attaggcctctgcaagagttgccaactgactacctgaccaagggcagagtgctcctcgct 60
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 475 attaggcctctgcaagagttaccgactgactacctgaccaagggcagagtgctcctcgct 416
Query: 61 gtgattttacagcactccttgtgcttgctatgtggacaggttggtttttgtaagttagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gtgattttacagcactccttgtgcttgctatgtggacaggttggtttttgtaagttagtt 356
Query: 121 acttcagtcccccaaagagaaagatctctgctaggattcctacatttgttttcagctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 acttcagtcccccaaagagaaagatctctgctaggattcctacatttgttttcagctttt 296
Query: 181 acaaattaaggagaggccccatggctcaggctggggcaagcgccgcatgatttgacagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 acaaattaaggagaggccccatggctcaggctggggcaagcgccgcatgatttgacagta 236
Query: 241 gcacttttgtctttggtctcttggttgaatcccaa 275
|||||||||||||||||||||||||||||||||||
Sbjct: 235 gcacttttgtctttggtctcttggttgaatcccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 675
Length adjustment: 9
Effective length of query: 266
Effective length of database: 666
Effective search space: 177156
Effective search space used: 177156
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
