Query= MSMg01no376_e24.b1 MSMg01no376_e24.b1 CHROMAT_FILE:
MSMg01no376_e24.b1 PHD_FILE: MSMg01no376_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:11 2005
(446 letters)
>mm_chr13_69290550_69291395
Length = 846
Score = 855 bits (442), Expect = 0.0
Identities = 442/442 (100%)
Strand = Plus / Plus
Query: 5 gaattcagtgggtcacctggggcttgaaaagggacagctgttctgtggaaggtaggtcca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtgggtcacctggggcttgaaaagggacagctgttctgtggaaggtaggtcca 264
Query: 65 agtcacacactaatgtggagagctgcatagggtctcaagtcacctctgtctaatatctgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agtcacacactaatgtggagagctgcatagggtctcaagtcacctctgtctaatatctgc 324
Query: 125 ttctttagattctacagcaaaagaaaatatcttgactgcattttctcatgtgtgatttcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttctttagattctacagcaaaagaaaatatcttgactgcattttctcatgtgtgatttcc 384
Query: 185 agggcagctgtcactcagctctgtcttgtgcttctggccaggtgacttttctcatcagat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agggcagctgtcactcagctctgtcttgtgcttctggccaggtgacttttctcatcagat 444
Query: 245 aacttaggtctgggaaggtgagtgcacctgacgcagtttccatggtcactgtgcatgtga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aacttaggtctgggaaggtgagtgcacctgacgcagtttccatggtcactgtgcatgtga 504
Query: 305 ccagaggcatgacatttctctcgtggaccatttccttctttatttatttattaattaaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccagaggcatgacatttctctcgtggaccatttccttctttatttatttattaattaaat 564
Query: 365 gttggtagtattggagactgaccttcttgcatgccaggcaggcactctcccactgggcta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gttggtagtattggagactgaccttcttgcatgccaggcaggcactctcccactgggcta 624
Query: 425 tgtccccctccgtcttgattcc 446
||||||||||||||||||||||
Sbjct: 625 tgtccccctccgtcttgattcc 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_e24.g1 MSMg01no376_e24.g1 CHROMAT_FILE:
MSMg01no376_e24.g1 PHD_FILE: MSMg01no376_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:11 2005
(388 letters)
>mm_chr13_69474318_69475105
Length = 788
Score = 739 bits (382), Expect = 0.0
Identities = 386/388 (99%), Gaps = 2/388 (0%)
Strand = Plus / Minus
Query: 1 caggccggggagacaccatgccttagtttgaaggtggataacatgtgaagaaccaaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 caggccggggagacaccatgccttagtttgaaggtggataacatgtgaagaaccaaatct 675
Query: 61 gaggttgactctgactttcagaaacacacacacacacacacacacacacacacacacaca 120
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 674 gaggttgactctgactttcagaa--acacacacacacacacacacacacacacacacaca 617
Query: 121 cacacacacacacacacacacacacacaaactctctctttctctctgacaacattcactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cacacacacacacacacacacacacacaaactctctctttctctctgacaacattcactt 557
Query: 181 tggctgtcattttagatccacttttgctgggcatagaattttcttcagcatctcttcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tggctgtcattttagatccacttttgctgggcatagaattttcttcagcatctcttcttt 497
Query: 241 aaagctgtcagtcattgtcttctgtctcccacttatcttacttaaaagtcagtatcaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aaagctgtcagtcattgtcttctgtctcccacttatcttacttaaaagtcagtatcaggc 437
Query: 301 ttctcccagcgtggctgcttcaagagctggggtttcttcctttccaaatggctgtggtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ttctcccagcgtggctgcttcaagagctggggtttcttcctttccaaatggctgtggtct 377
Query: 361 gcatgctctgcattcgcactgcttgttt 388
||||||||||||||||||||||||||||
Sbjct: 376 gcatgctctgcattcgcactgcttgttt 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 103
Number of extensions: 37
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
