NCCTATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCATCAGGAGTCTTTCTAGACTACTTTCCACCTATTATTTCTT
CTCTCCTCCTCCTCCTCCTCTTCTTTTTTTCAGACAGGATCTCACTGTAT
AGCTCTTCCTAGCCTGGAATTCAGAGATGGGCCCATCTCTCCCTTCTGAG
TGCTGGGATGAAGGCATGTGACACCATGCGTATCCAGCTCTACCTTATGT
CCTGAGACAGGGTCTCTCACTGAGCCTGAAGCTCATGAACAGGACTAGAC
TAGGTAGCCAGTGAAATCCCAAGATCAACATCCAGGGCTTTCTGCCTCTC
CAGAGCTGGGATTTAGACATGTGCTGCCATACTAGGCACCCTGGGTTTTG
TGAAACATATCTTTGGATGGTTTGCCTGGCAATGACCTANAAATCTCGAA
ACTAGTATTGATAGAGTAGGCATGAAGATCTTCAGGTCTGTTCTTCTCTA
TAATAAAAGATGGGGTAAGCATTAGATATTCTCTAAGAGGGTCTTGCCTG
CTGAAAAAACTTTATCAGCGACTGCCCACCTATTTCTCAACTTCAGAAGT
CACGTTTTCCAATTAGGTTAGGGATGCATCTCGGAAACTCTGGCCTGGTT
CCCATGGTTCTCGGTTATTCCCTACCCAGGTGGGTAACCCTCTCTATTCC
CATATTTGCCCCTATTTATATAATTCCCTCCCCCCCCCAATGGGGTATCC
CCCTAATCG

NNNNGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGGTTATAGTTTTATAGT
TAAAAGGCATCAGCATGGGCTTTATGCAAGTCTCGGAAGAGCAAGAAATG
TGCCCACGCTCACCCTATCAACATCTCCCACTAGTTGACTGTACTTACTA
CAGCCAAAGAACTGTTTTGACTCATAGTTACAACTAGGTGAAAGTTAACA
GGGATCATTGTTCTTGATTAGACTCCTGCATTGGATCCAAATAGAACAGG
CTGAAAATAAAGTCACCCCTTCAAGGTCTCTATCACTGTGCTCCTCCATC
AATGTCAAGATGCATCATAATGAAATTCTCTCTGCCATTATCCTTACACA
CGAGCACACACGCTCACACGTGTGCACACACACACACATACACACCTGAT
GCCAATTAATTAGCTATTTCCCTAGTATTTTATCTTCTACGGTTTCCATC
TTAAATGTGTGAAAGACCTAGACCACAGCCTATAGCATTATGGGAAGATG
GTTTTGTCTCCCGAGGTATAACCCAGTGAAGGTGAATTAAATTCTTTGGA
GGTCCCCCCTTGCAGCGGAAATGGTCTCCCAATTCCTTTCCCGCGCCCCC
CCGCTTATGGCCCTCAATTATGGGTATTTTTCTGTCCATTGTCCCCCCGC
CCCCCACCTCTATTTTTTTCCTCGGTTAGACCTTATCCCCTTTTTTCTTC
G

Query= MSMg01no377_h02.g1 MSMg01no377_h02.g1 CHROMAT_FILE:
MSMg01no377_h02.g1 PHD_FILE: MSMg01no377_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:37 2005
         (440 letters)



>mm_chr13_30245319_30246158
          Length = 840

 Score =  843 bits (436), Expect = 0.0
 Identities = 439/440 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   taggttatagttttatagttaaaaggcatcagcatgggctttatgcaagtctcggaagag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 taggttatagttttatagttaaaaggcatcagcatgggctttatgcaagtctcggaagag 455

                                                                       
Query: 61  caagaaatgtgcccacgctcaccctatcaacatctcccactagttgactgtacttactac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 caagaaatgtgcccacgctcaccctatcaacatctcccactagttgactgtacttactac 395

                                                                       
Query: 121 agccaaagaactgttttgactcatagttacaactaggtgaaagttaacagggatcattgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 agccaaagaactgttttgactcatagttacaactaggtgaaagttaacagggatcattgt 335

                                                                       
Query: 181 tcttgattagactcctgcattggatccaaatagaacaggctgaaaataaagtcacccctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tcttgattagactcctgcattggatccaaatagaacaggctgaaaataaagtcacccctt 275

                                                                       
Query: 241 caaggtctctatcactgtgctcctccatcaatgtcaagatgcatcataatgaaattctct 300
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 274 caaggtctctatcactgtgctcctccatcagtgtcaagatgcatcataatgaaattctct 215

                                                                       
Query: 301 ctgccattatccttacacacgagcacacacgctcacacgtgtgcacacacacacacatac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ctgccattatccttacacacgagcacacacgctcacacgtgtgcacacacacacacatac 155

                                                                       
Query: 361 acacctgatgccaattaattagctatttccctagtattttatcttctacggtttccatct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 acacctgatgccaattaattagctatttccctagtattttatcttctacggtttccatct 95

                               
Query: 421 taaatgtgtgaaagacctag 440
           ||||||||||||||||||||
Sbjct: 94  taaatgtgtgaaagacctag 75


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space:   358161
Effective search space used:   358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)