Query= MSMg01no377_n23.b1 MSMg01no377_n23.b1 CHROMAT_FILE:
MSMg01no377_n23.b1 PHD_FILE: MSMg01no377_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:13 2005
(400 letters)
>mm_chr13_98036350_98037147
Length = 798
Score = 716 bits (370), Expect = 0.0
Identities = 389/396 (98%), Gaps = 2/396 (0%)
Strand = Plus / Plus
Query: 5 gaattctcaacacatagtcctcagctgcacggtgtccactggaatcatctaaggaaaact 64
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaacacagagttctcagctgcacggtgtccactggaatcatctaaggaaaact 264
Query: 65 tagatgatttgaaaactgttgacgcccaccttcggactcttgaagtctccccagtcacca 124
|||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 265 tagatgatttgaaaac--ttgacgcccaccttcagactcttgaagtctcctcagtcacca 322
Query: 125 tctaatcctgacatccatgcagtgtgtatacatgtttgagttttgaggtcagcagaaggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tctaatcctgacatccatgcagtgtgtatacatgtttgagttttgaggtcagcagaaggg 382
Query: 185 ctttattgagcagggcaggcagatgtccccaggagtaaggagatgggatttctcttctag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctttattgagcagggcaggcagatgtccccaggagtaaggagatgggatttctcttctag 442
Query: 245 acctacctctgacggtgactgccactgtcctaagttcatgatcagacagctcacatttgt 304
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 acctacctctgacagtgactgccactgtcctaagttcatgatcagacagctcacatttgt 502
Query: 305 gcacatgaatgtatctacagtgggtggcattgaaggtgcctcaattatttagaatttaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gcacatgaatgtatctacagtgggtggcattgaaggtgcctcaattatttagaatttaga 562
Query: 365 ttcttctttcagacagctggggttggaggtttgttt 400
||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttcttctttcagacagctggggttggaggtttgttt 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 798
Length adjustment: 9
Effective length of query: 391
Effective length of database: 789
Effective search space: 308499
Effective search space used: 308499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_n23.g1 MSMg01no377_n23.g1 CHROMAT_FILE:
MSMg01no377_n23.g1 PHD_FILE: MSMg01no377_n23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:13 2005
(350 letters)
>mm_chr13_98223777_98224526
Length = 750
Score = 605 bits (313), Expect = e-177
Identities = 325/329 (98%)
Strand = Plus / Minus
Query: 22 tttgcatgccatgacagaagagatctggagcattggacatgtttttttcttcttgatttt 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tttgcatgccatgacagaagagatctggagcattggacatgtttttttcttcttgatttt 691
Query: 82 tcaagacagggtttctctatatagccctggctatcctggaacttactctgtagaccaggc 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tcaagacagggtttctctatatagccctggctatcctggaacttactctgtagaccaggc 631
Query: 142 tggcctcaaactcagaaatccacctgcctctgccttccaagtgctggtattcaaggcatg 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tggcctcaaactcagaaatccacctgcctctgccttccaagtgctggtattcaaggcatg 571
Query: 202 ggccaccaccacccggctggacacgatttttaaaaaggtcccagaagcaggataccaggg 261
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ggccaccactacccggctgaacacgatttttaaaaaggtcccagaagcaggataccaggg 511
Query: 262 cttcccttcaccttgcagtctcctgaaaaatcttccaacgaaaacaagtgtctggagggc 321
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 510 cttcccttcaccttgtagtctcctgaaaactcttccaacgaaaacaagtgtctggagggc 451
Query: 322 tgtgatgagctaatactgtgctcgatcat 350
|||||||||||||||||||||||||||||
Sbjct: 450 tgtgatgagctaatactgtgctcgatcat 422
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
