XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTC
ACCCTAGCAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACAT
TCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTC
ACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAGCAGATGCTG
GCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCA
GGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTG
GACATAGTACTACTGGAGGATCCAGCAATTCCTCTCCTGGGCATATATCC
AGAAGATGTCCTAACCGGTAAGAAGGACACATGCTCCACTATGTTCATAG
CAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAATCCAGATACCCCTCA
ACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGCGTACTA
CTCAGCTATTAAAAAGAATAAATTTATGAAATTCCTAGCCAAATGGATGG
ACCTGGAGGGTATCATCCTGAATGAGTTAACCCAGTCACAAAGGAACTCA
CACAATATGTACTCATTGATAAGTGGATATTAGCCCAAAACCTAGGATAA
CCAAGATATAAGATACAATTTGCTATACACATGAAACTCACGAAGAATGA
AGACTGAAGTGTGGACACTATGCCCCTCCCTACAATTGGGAACAAAACAC
CC

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTGAGCCAAGAACAGTTAGCCAAGTAAACCC
TCTCCAATGCTGACTGTACGACTATCATGGCAGCTCATTGAAATGAACTG
AGAAACTCTATAACCACAACTTCTGTCTAAGCAGAGCTTGTTTCAGGCAC
AGCTGAACTAGAGATTTGCATTAGTTTAAGAAGATATACCTTGAGGAGAA
ACTTCAAAGGGCTGATTTTACTCCTTTGTAGCTACTTTCATTTAGGCCTT
TTTGTGCACCACTTTTCCTGTGGTTTCCCAGAATTCTTGTGATTGTATCA
AAGTGGATCCTGTAATGGGCTACTTTTAATGTCATGTGATTTGTCCTGAT
GTAAGCCATGTAATTGATGGAATGACAAAATGATTCACAAATACTGCACT
TTTGAATTTTCATACCACACCTATTCCATGCATTGTTGTAGGATATGTAA
TAGACTGTTCAACTTGTTTTTCAAGTAATCTGAGAACAGCTTCCTGGCAC
CTGCTGTTATACTTTAGACACTCCCTCCATCAAAAAGCTTCTCTTAAAGA
GTTTTATCTGGGGTTAGACAGCTTGGTGTANCAACTTGAAGTCGAGAAGA
AAGCAGCTGCAGAGGGGTTGCAGTGATAACAGCACTTGTGGTGGGTATGT
TTTTAAAGAGGCCACCGAGCAATAGGGATGGCCTAATTCCAATGTTGTAC
N

Query= MSMg01no380_k15.g1 MSMg01no380_k15.g1 CHROMAT_FILE:
MSMg01no380_k15.g1 PHD_FILE: MSMg01no380_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:48 2005
         (572 letters)



>mm_chr13_86867974_86868945
          Length = 972

 Score = 1093 bits (565), Expect = 0.0
 Identities = 570/572 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgagccaagaacagttagccaagtaaaccctctccaatgctgactgtacgactatcatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 ttgagccaagaacagttagccaagtaaaccctctccaatgctgactgtacgactatcatg 713

                                                                       
Query: 61  gcagctcattgaaatgaactgagaaactctataaccacaacttctgtctaagcagagctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gcagctcattgaaatgaactgagaaactctataaccacaacttctgtctaagcagagctt 653

                                                                       
Query: 121 gtttcaggcacagctgaactagagatttgcattagtttaagaagatataccttgaggaga 180
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gtttcaagcacagctgaactagagatttgcattagtttaagaagatataccttgaggaga 593

                                                                       
Query: 181 aacttcaaagggctgattttactcctttgtagctactttcatttaggcctttttgtgcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aacttcaaagggctgattttactcctttgtagctactttcatttaggcctttttgtgcac 533

                                                                       
Query: 241 cacttttcctgtggtttcccagaattcttgtgattgtatcaaagtggatcctgtaatggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cacttttcctgtggtttcccagaattcttgtgattgtatcaaagtggatcctgtaatggg 473

                                                                       
Query: 301 ctacttttaatgtcatgtgatttgtcctgatgtaagccatgtaattgatggaatgacaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ctacttttaatgtcatgtgatttgtcctgatgtaagccatgtaattgatggaatgacaaa 413

                                                                       
Query: 361 atgattcacaaatactgcacttttgaattttcataccacacctattccatgcattgttgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 atgattcacaaatactgcacttttgaattttcataccacacctattccatgcattgttgt 353

                                                                       
Query: 421 aggatatgtaatagactgttcaacttgtttttcaagtaatctgagaacagcttcctggca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 aggatatgtaatagactgttcaacttgtttttcaagtaatctgagaacagcttcctggca 293

                                                                       
Query: 481 cctgctgttatactttagacactccctccatcaaaaagcttctcttaaagagttttatct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 cctgctgttatactttagacactccctccatcaaaaagcttctcttaaagagttttatct 233

                                           
Query: 541 ggggttagacagcttggtgtancaacttgaag 572
           ||||||||||||||||||||| ||||||||||
Sbjct: 232 ggggttagacagcttggtgtagcaacttgaag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)