Query= MSMg01no380_n11.b1 MSMg01no380_n11.b1 CHROMAT_FILE:
MSMg01no380_n11.b1 PHD_FILE: MSMg01no380_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:01 2005
(574 letters)
>mm_chr13_118914697_118915670
Length = 974
Score = 714 bits (369), Expect = 0.0
Identities = 372/373 (99%), Gaps = 1/373 (0%)
Strand = Plus / Minus
Query: 1 tcttgacctgagcctctttcttcgttgtccatctttcctgtcctacatgacataaaagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tcttgacctgagcctctttcttcgttgtccatctttcctgtcctacatgacataaaagtc 314
Query: 61 tccttttcttcatgttcccatcaccatgatgacatggatcatcctggacttagaatccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tccttttcttcatgttcccatcaccatgatgacatggatcatcctggacttagaatccgc 254
Query: 121 aggcccagtggctctaggatgacatctgttatactttctgctacaatcatgtctgtcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aggcccagtggctctaggatgacatctgttatactttctgctacaatcatgtctgtcctg 194
Query: 181 ggagcttttcatttttatgattgagaagcatgaccaagtcaacttctagaaagagtttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ggagcttttcatttttatgattgagaagcatgaccaagtcaacttctagaaagagtttct 134
Query: 241 ttatagcttaaaatttcagagttagagtccttgatcaacctgatcaggattatggcagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttatagcttaaaatttcagagttagagtccttgatcaacctgatcaggattatggcagta 74
Query: 301 ggaaggcaagaacagtgctggggctgtagttaaaggttacattttgacaccccccccc-g 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 73 ggaaggcaagaacagtgctggggctgtagttaaaggttacattttgacaccccccccccg 14
Query: 360 ccccgcaagcatg 372
|||||||||||||
Sbjct: 13 ccccgcaagcatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_n11.g1 MSMg01no380_n11.g1 CHROMAT_FILE:
MSMg01no380_n11.g1 PHD_FILE: MSMg01no380_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:01 2005
(571 letters)
>mm_chr13_118786662_118787632
Length = 971
Score = 1073 bits (555), Expect = 0.0
Identities = 567/571 (99%)
Strand = Plus / Plus
Query: 1 agattgtatatctgtatgaaaattttctttgactatagagtgattcctcttttctctctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agattgtatatctgtatgaaaattttctttgactatagagtgattcctcttttctctctt 260
Query: 61 gtatatgttacaggaatataaaaatgtgaagtgaaagtaattttgaaatctggcatgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatatgttacaggaatataaaaatgtgaagtgaaagtaattttgaaatctggcatgaat 320
Query: 121 atgtgaaatgggttaacaatttaactaaattatttttaatctacagttatttttaatcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtgaaatgggttaacaatttaactaaattatttttaatctacagttatttttaatcta 380
Query: 181 cagtttcagtgtcagaggcaaaagaaaaacagttttctataagcttcccacattgctatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtttcagtgtcagaggcaaaagaaaaacagttttctataagcttcccacattgctatt 440
Query: 241 gaaactttctaattttactataaggaatttgcaggttaaattatttaaattctggccact 300
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaacagtcaaattttactataaggaatttgcaggttaaattatttaaattctggccact 500
Query: 301 aaaaatcactgttaaaaattgttagaattgaatgcatcaattgaaccctaatactaggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaaatcactgttaaaaattgttagaattgaatgcatcaattgaaccctaatactaggtt 560
Query: 361 agttggatgggttagttacagatgaatgtaaaataaataaaatattccctatgaagtaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agttggatgggttagttacagatgaatgtaaaataaataaaatattccctatgaagtaat 620
Query: 421 aacaattaataggaagatatgtgataagtgtagacaaacggtattgaaataaattatcaa 480
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 aacaattaataggaagatatgtgataagtgtagacaaagggtattgaaataaattatcaa 680
Query: 481 caaataccaacaagttcaacattaacatttgtactttataagtagccatttaaaattata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caaataccaacaagttcaacattaacatttgtactttataagtagccatttaaaattata 740
Query: 541 tgaatgaacaatttttaagtttgttcttttt 571
|||||||||||||||||||||||||||||||
Sbjct: 741 tgaatgaacaatttttaagtttgttcttttt 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
