Query= MSMg01no380_o17.b1 MSMg01no380_o17.b1 CHROMAT_FILE:
MSMg01no380_o17.b1 PHD_FILE: MSMg01no380_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:08 2005
(503 letters)
>mm_chr13_43328538_43329440
Length = 903
Score = 833 bits (431), Expect = 0.0
Identities = 484/505 (95%), Gaps = 10/505 (1%)
Strand = Plus / Minus
Query: 5 gaattccttctcctccctcttgagcttctcttctcccatccaaattgaccaagtctaccc 64
|||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 655 gaattccttctccttcctctttagcttctcttctcccatccaaattgactaagtctaccc 596
Query: 65 tggtccatccccggagtctcatgagccattctctacttctttcctgccagactatgggag 124
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 595 tggtccatccccggagtctcatgagccattctctacttctttcctgccaggctatgggag 536
Query: 125 cgcttggtgctgtttctttgtgattgttgttgtaaggatttcccaactattagagagaca 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tgcttggtgctgtttctttgtgattgttgttgtaaggatttcccaactattagagagaca 476
Query: 185 ggcttccctgaaaaagtcagataagccatgcaagcgcagagggtgagccccacatcatta 244
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 475 ggcttccctgaaaaagtcagataagccattcaagcgcagagggtgagccccacatcatta 416
Query: 245 gcgcagagcattgcaccattatgatacagattctgacatggcttgcgacatttatctgaa 304
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 415 gagcagagcattgcaccattatgatccagattctgacatggcttgcgacatttatctgaa 356
Query: 305 gttcagacatcttgctagagatgccaaggaaaatattttcaaatcactggggcctggggc 364
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gttcaggcatcttgctagagatgccaaggaaaatattttcaaatcactggggcctggggc 296
Query: 365 ttcgtttctccctttaccagcctgtctgatgacctcagctggctgtgacctttaccccgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ttcgtttctccctttaccagcctgtctgatgacctcagctggctgtgacctttaccccgc 236
Query: 425 cactttcagaattttgccagttcacaaaaaaagc--ta-a-----aagtcttggggtagg 476
||||||||||||||||||||||||| |||||||| || | ||||||||||| |||
Sbjct: 235 cactttcagaattttgccagttcac-aaaaaagctttagacttttaagtcttgggg-agg 178
Query: 477 atttggggggtcggggtgggggttg 501
|||||| |||| |||||||||||||
Sbjct: 177 atttggagggtgggggtgggggttg 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_o17.g1 MSMg01no380_o17.g1 CHROMAT_FILE:
MSMg01no380_o17.g1 PHD_FILE: MSMg01no380_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:08 2005
(169 letters)
>mm_chr13_43144414_43144983
Length = 570
Score = 298 bits (154), Expect = 1e-85
Identities = 166/170 (97%), Gaps = 1/170 (0%)
Strand = Plus / Plus
Query: 1 ttctttctgtcaggaaccaaggaatgataaatgagcttttctttttaacaaa-tttatgg 59
||||||||| ||||||||||||||||| ||||| |||||||||||||||||| |||||||
Sbjct: 201 ttctttctggcaggaaccaaggaatgagaaatgggcttttctttttaacaaaatttatgg 260
Query: 60 ggaagtattttgttttgattttaattttgcatttaagttaataaggcttcgtgtacagtt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaagtattttgttttgattttaattttgcatttaagttaataaggcttcgtgtacagtt 320
Query: 120 ttatatctttttgtcctgattataaaagtattctctttgatagtttcatg 169
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatatctttttgtcctgattataaaagtattctctttgatagtttcatg 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 570
Length adjustment: 8
Effective length of query: 161
Effective length of database: 562
Effective search space: 90482
Effective search space used: 90482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
