Query= MSMg01no382_a03.b1 MSMg01no382_a03.b1 CHROMAT_FILE:
MSMg01no382_a03.b1 PHD_FILE: MSMg01no382_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:36 2005
(605 letters)
>mm_chr13_39251428_39252433
Length = 1006
Score = 1035 bits (535), Expect = 0.0
Identities = 582/601 (96%), Gaps = 9/601 (1%)
Strand = Plus / Plus
Query: 7 gaattcctgcaag-tttcatttttctcctaaa-tatcactatttgttcatgaaaggtaat 64
||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 207 gaattcctgcaagctttaatttttctcctaaaatatcactatttgttcatgaaagataat 266
Query: 65 tctcctgcacttggccctcccttgtggcttaagagacaatgttcaaaagcaggtgtgagg 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 267 tctcctgcacttggccctccctcgtggcttaagagacaatgttcaaaagcaggtgtgagg 326
Query: 125 cattgctatagtaatgtaaccatttagatatggaccttaaggtggctaatagaagacagt 184
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 327 cattgctatagtaatgtaaccatttagatatggaccttaaggtagctaatagaagacagt 386
Query: 185 gaagatagcctggaattttcatgtattctgagaccagaaaagtgaatagatgcaagggaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gaagatagcctggaattttcatgtattctgagaccagaaaagtgaatagatgcaagggaa 446
Query: 245 aagaggagagaaatctttctgggagatagagaccatatttta---gcataacacattggg 301
||||||||||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct: 447 aagaggagagaaatctttctgggagatagagaccaga----aaaagcataacacattggg 502
Query: 302 caaacatggaagagtaccttataactgaatatcaagttcacaggaatgatcctgaaacac 361
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 503 caaacatggaagagtaccttataactgaatatcaagttcacaggaatgagcctgaaacac 562
Query: 362 tggctctacaataggtctttagagtgatggcagagatgcagtagatgcctagtgtgctgc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tggctctacaataggtctttagagtgatggcagagatgcagtagatgcctagtgtgctgc 622
Query: 422 ttgtgccctaacaagattgttcctgtgatgcatatatgtgaagctaggacaaaaagttgg 481
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 623 ttgtgccctaacaagattgttcctgtgatgcatgtatgtgaagctaggacaaaaagttgg 682
Query: 482 aaactcagcagtcactcagggcgagaagcaatgccaactggagctaggaagggatggcga 541
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aaactcagcagtcactcagggagagaagcaatgccaactggagctaggaagggatggcga 742
Query: 542 gaatgaagagcagtggatagagctgagagagacaagttggtaaatcccaagcttgctatt 601
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 743 gaatgaagagcagtggaaagagctgagagagacaagttggtaaatcccgagcttgctatt 802
Query: 602 t 602
|
Sbjct: 803 t 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1006
Length adjustment: 10
Effective length of query: 595
Effective length of database: 996
Effective search space: 592620
Effective search space used: 592620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_a03.g1 MSMg01no382_a03.g1 CHROMAT_FILE:
MSMg01no382_a03.g1 PHD_FILE: MSMg01no382_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:36 2005
(435 letters)
>mm_chr13_39439330_39440164
Length = 835
Score = 750 bits (388), Expect = 0.0
Identities = 392/394 (99%), Gaps = 2/394 (0%)
Strand = Plus / Minus
Query: 1 cttcatggctttcataatgagatgtttacaaaccatcccagacaactggaaaacaatagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cttcatggctttcataatgagatgtttacaaaccatcccagacaactggaaaacaatagc 333
Query: 61 accgcgctcactgccttgatgccagttcagtctctcttacatcgtttgcgttctcagagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 accgcgctcactgccttgatgccagttcagtctctcttacatcgtttgcgttctcagagg 273
Query: 121 aaatctgttcccattccttttcaaagatttattgaaagctgtatttctaatttcatatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aaatctgttcccattccttttcaaagatttattgaaagctgtatttctaatttcatatat 213
Query: 181 atgcattgattaacatcactttcctccctcctccctctactctgccaccccacagctccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atgcattgattaacatcactttcctccctcctccctctactctgccaccccacagctccc 153
Query: 241 taccctctttcaaattattttctttaattattatttttattgaattattattgttatata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 taccctctttcaaattattttctttaattattatttttattgaattattattgttatata 93
Query: 301 tatatgtatatattgtgaataaatatgtaagtacaacctgatgattctttatttgtaggt 360
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 tat--gtatatattgtgaataaatatgtaagtacaacctgatgattctttatttgtaggt 35
Query: 361 atgtctctgaatgcatgtgcatgctctatgtgtg 394
||||||||||||||||||||||||||||||||||
Sbjct: 34 atgtctctgaatgcatgtgcatgctctatgtgtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
