Query= MSMg01no382_e19.b1 MSMg01no382_e19.b1 CHROMAT_FILE:
MSMg01no382_e19.b1 PHD_FILE: MSMg01no382_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:00 2005
(465 letters)
>mm_chr13_8342264_8343128
Length = 865
Score = 861 bits (445), Expect = 0.0
Identities = 457/461 (99%)
Strand = Plus / Minus
Query: 5 gaattccttaatgttacatgccttgtaatatctaagaagaaaggtctggccaggcgacat 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gaattccttaatgttaaatgccttgtaatatctaagaagaaaggtctggccaggcgacat 606
Query: 65 gagagcagcctattaagtcacctgtaacatgggacacctaggtagaagagtgaaaaccat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gagagcagcctattaagtcacctgtaacatgggacacctaggtagaagagtgaaaaccat 546
Query: 125 gcgtgggaaccatggcttacatgccacacacatagatgtcatcaacttacaggacagttg 184
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gcgagggaaccatggcttacatgccacacacatagatgtcatcaacttacaggacagttg 486
Query: 185 aaaaatgtaactcacaggccatatatgcaatgccaatgaagtggctcaaaaataaactta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aaaaatgtaactcacaggccatatatgcaatgccaatgaagtggctcaaaaataaactta 426
Query: 245 aaccaatgaattaggaaatgtattttgtgagctaatagtacatttgaaacataaaattcg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aaccaatgaattaggaaatgtattttgtgagctaatagtacatttgaaacataaaattcg 366
Query: 305 aattcccagtgcatgttttgttactgggtccgttgtgctaaagggtctgagggcctaggg 364
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aattcccagtgaatgttttgttactgggtccgttgtgctaaagggtctgagggcctaggg 306
Query: 365 attgtgagaaggacagatgaaccaaggcaatggataatctcgccattctgttaggaggaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 attgtgagaaggacagatgaaccaaggcaatggataatctcgccattctgttaggaggaa 246
Query: 425 cttacttattgctttggttttctggtcggcaaaaatgagga 465
|||||||||||||||||||| ||||||||||||||||||||
Sbjct: 245 cttacttattgctttggtttgctggtcggcaaaaatgagga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_e19.g1 MSMg01no382_e19.g1 CHROMAT_FILE:
MSMg01no382_e19.g1 PHD_FILE: MSMg01no382_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:00 2005
(359 letters)
>mm_chr9_102536014_102536772
Length = 759
Score = 203 bits (105), Expect = 1e-56
Identities = 126/133 (94%)
Strand = Plus / Minus
Query: 226 tgcttttgagtggtcatttattgctaaagatctgcatttggcgacaggaaacatttttat 285
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgcttttgagtgttgatttattgctaaagatctgcatttggcgacaggaaacatttttat 500
Query: 286 ccccatatgtttgaaaactccacccatgggaaggagtccggaatcagtttccagcgggtg 345
||||||||||||||||||||| || |||||||||| |||| ||||||||||||||||||
Sbjct: 499 ccccatatgtttgaaaactccgtccgtgggaaggagcccggcatcagtttccagcgggtg 440
Query: 346 ggacgttctcgtg 358
|||||||||||||
Sbjct: 439 ggacgttctcgtg 427
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
