Query= MSMg01no382_j24.b1 MSMg01no382_j24.b1 CHROMAT_FILE:
MSMg01no382_j24.b1 PHD_FILE: MSMg01no382_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:25 2005
(519 letters)
>mm_chr13_74312459_74313377
Length = 919
Score = 830 bits (429), Expect = 0.0
Identities = 438/441 (99%), Gaps = 2/441 (0%)
Strand = Plus / Minus
Query: 80 tagtgtgggatacactgacatactataccttccatgacaagatgttttctatgcttgttt 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 tagtgtgggatacactgacatactataccttccatgacaagatgttttctatgcttgttt 860
Query: 140 tgttttgcttattttttttgtttgctttttattttattttggggggcattgcaagggtag 199
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 859 tgttttgctta-tttttttgtttgctttttattttattttggggggcattgcaagggcag 801
Query: 200 ggggcagatacagggaagagggagatgagtggaactggggtatatgatgtgaaacttgca 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ggggcagatacagggaagagggagatgagtggaactggggtatatgatgtgaaacttgca 741
Query: 260 gagaaacatt-aaaaatttttttaaagtagtcttgaacctgtatctttacattccagcag 318
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gagaaacattaaaaaatttttttaaagtagtcttgaacctgtatctttacattccagcag 681
Query: 319 ttatgtgttgtttttaaatattgtagttgcttatttttctaaaattaacagatttttatc 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttatgtgttgtttttaaatattgtagttgcttatttttctaaaattaacagatttttatc 621
Query: 379 tttttactttgtttccttcaagcatttgtgtgttggttttttagcagggtctgactgcca 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttttactttgtttccttcaagcatttgtgtgttggttttttagcagggtctgactgcca 561
Query: 439 gatatagagtttgggcctgtttgtttctaaccatgttagggcttgtccttgcgagctgtc 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gatatagagtttgggcctgtttgtttctaaccatgttagggcttgtccttgcgagctgtc 501
Query: 499 ttaatagcttatctcctggta 519
|||||||||||||||||||||
Sbjct: 500 ttaatagcttatctcctggta 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_j24.g1 MSMg01no382_j24.g1 CHROMAT_FILE:
MSMg01no382_j24.g1 PHD_FILE: MSMg01no382_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:25 2005
(499 letters)
>mm_chr13_74137115_74138013
Length = 899
Score = 965 bits (499), Expect = 0.0
Identities = 499/499 (100%)
Strand = Plus / Plus
Query: 1 tctatttctatttctctcttcaattctgtttttgctccacatcttttaggacaatgtctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctatttctatttctctcttcaattctgtttttgctccacatcttttaggacaatgtctt 260
Query: 61 taggtatacaaattgggccttttatcaagaatatataatgtatttctttggacactgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taggtatacaaattgggccttttatcaagaatatataatgtatttctttggacactgtgt 320
Query: 121 tttatttggttttggttgtttgagaatggacaaagggagtagaattcatcaaaaggccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttatttggttttggttgtttgagaatggacaaagggagtagaattcatcaaaaggccaa 380
Query: 181 taggatgttatatgcatccataaagttactgttaagaaaagacttcacggtttttacaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggatgttatatgcatccataaagttactgttaagaaaagacttcacggtttttacaat 440
Query: 241 tttgtgattgtcatggattatatttattcattatgggcccaataacaactatttattatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgtgattgtcatggattatatttattcattatgggcccaataacaactatttattatt 500
Query: 301 attttagtatttatcctttaaattatatagaagagagaggaattaaaatgtaagcataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attttagtatttatcctttaaattatatagaagagagaggaattaaaatgtaagcataat 560
Query: 361 atttggactattgtacatttatttaatctgttttctttatccctcacagctttgtatagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttggactattgtacatttatttaatctgttttctttatccctcacagctttgtatagc 620
Query: 421 atgtctgaataactgtatagcattcccttagcagttgtataattgtataataattccctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgtctgaataactgtatagcattcccttagcagttgtataattgtataataattccctt 680
Query: 481 agcacttttttttttcagg 499
|||||||||||||||||||
Sbjct: 681 agcacttttttttttcagg 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
