Query= MSMg01no383_b05.b1 MSMg01no383_b05.b1 CHROMAT_FILE:
MSMg01no383_b05.b1 PHD_FILE: MSMg01no383_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:01 2005
(519 letters)
>mm_chr13_43381656_43382575
Length = 920
Score = 961 bits (497), Expect = 0.0
Identities = 512/517 (99%), Gaps = 1/517 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagcattggcctaaggaaaaaacgtacttcccaaagcacaaggcgaatcagtgc 63
||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 627 ggaatccagcattggccaaaggaaaaaacgtactttccaaagcacaaggcgaatcagtgc 568
Query: 64 cttgaatcaacgactacactaggagcctctggtgtttttgtgagtgatatatacctgact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cttgaatcaacgactacactaggagcctctggtgtttttgtgagtgatatatacctgact 508
Query: 124 ctcactttaggggagcaagctaggctcctggctgactatttataaccctaactctgtgtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ctcactttaggggagcaagctaggctcctggctgactatttataaccctaactctgtgtg 448
Query: 184 gcctaaacccaagcacagctggagggagctgatctgttcttatcctgtcctttgctgctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gcctaaacccaagcacagctggagggagctgatctgttcttatcctgtcctttgctgctt 388
Query: 244 gaacttgaacctgtgtttaaaaaaaaa-ggttttgttaacctttcccttcaaaggatata 302
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 387 gaacttgaacctgtgtttaaaaaaaaaaggttttgttaacctttcccttcaaaggatata 328
Query: 303 gggatgagacaggggcatgtgttctgaaatataacgtggcgagagggtagctggcaggcc 362
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 327 gggatgagacaggggcatgtgttctgaaatataacgtggtgagagggtagctggcaggcc 268
Query: 363 cattccaaggtgtgcccctgaataattgcatcatgcaatagtaagctaactgcacagtgg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cattccaaggtgtgcccctgaataattgcatcatgcaatagtaagctaactgcacagtgg 208
Query: 423 atgcgcagtcttagcaccgaggaggaggcagaggcaagagcatcaggagatcaagggcat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atgcgcagtcttagcaccgaggaggaggcagaggcaagagcatcaggagatcaagggcat 148
Query: 483 ctttagttgcatagcagatttgatgtcagtgagaccc 519
|||||||||||||||||||||||||||||||||||||
Sbjct: 147 ctttagttgcatagcagatttgatgtcagtgagaccc 111
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 920
Length adjustment: 10
Effective length of query: 509
Effective length of database: 910
Effective search space: 463190
Effective search space used: 463190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_b05.g1 MSMg01no383_b05.g1 CHROMAT_FILE:
MSMg01no383_b05.g1 PHD_FILE: MSMg01no383_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:01 2005
(547 letters)
>mm_chr13_43210807_43211753
Length = 947
Score = 1050 bits (543), Expect = 0.0
Identities = 546/547 (99%)
Strand = Plus / Plus
Query: 1 cagggctacataaagagaccatgcctcaaaaaacaaaaaagaagaatagccttgctcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagggctacataaagagaccatgcctcaaaaaacaaaaaagaagaatagccttgctcaaa 260
Query: 61 tcagtgtgttctatgtgtcactgcactaactaacttagtttctgttgtaacaactcaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagtgtgttctatgtgtcactgcactaactaacttagtttctgttgtaacaactcaaat 320
Query: 121 gctccttcagggtgacacccacctacctgtttacaagctactgtgtcccctggacctaag 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctccttcagggtgacatccacctacctgtttacaagctactgtgtcccctggacctaag 380
Query: 181 aactctggaaacatctactgtgcaggctgtcaaaattttcttgcttttctgttttgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aactctggaaacatctactgtgcaggctgtcaaaattttcttgcttttctgttttgtttt 440
Query: 241 ttcatgggtttggtgcctaataacatacacagctgtatcactattccagaacaaatttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcatgggtttggtgcctaataacatacacagctgtatcactattccagaacaaatttcc 500
Query: 301 actcaacaccaatggcatttgtacaatgtttctcctggttattgtctcagcatgcaatat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actcaacaccaatggcatttgtacaatgtttctcctggttattgtctcagcatgcaatat 560
Query: 361 tgggcctcaggttgaggtcctactggggtcatggctcccaaaacagttagccaaaaatac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgggcctcaggttgaggtcctactggggtcatggctcccaaaacagttagccaaaaatac 620
Query: 421 tctaactgtaacctatttaatctcttcaagtgaggggccttttcctacttaccaaaaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctaactgtaacctatttaatctcttcaagtgaggggccttttcctacttaccaaaaata 680
Query: 481 gttcatgctttattcttgcttgttaaaagtgtctttcatgggccgttctctgttgaccct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gttcatgctttattcttgcttgttaaaagtgtctttcatgggccgttctctgttgaccct 740
Query: 541 cccaaga 547
|||||||
Sbjct: 741 cccaaga 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
