Query= MSMg01no383_d24.b1 MSMg01no383_d24.b1 CHROMAT_FILE:
MSMg01no383_d24.b1 PHD_FILE: MSMg01no383_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:16 2005
(556 letters)
>mm_chr13_81920940_81921891
Length = 952
Score = 1033 bits (534), Expect = 0.0
Identities = 546/552 (98%), Gaps = 4/552 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaagatctgcttacatgtctcttgggtgctgggattaaacatgtgtagcaccat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaagatctgcttacatgtctcttgggtgctgggattaaacatgtgtagcaccat 264
Query: 65 gcccagttgagttcttcaacatttttctactttggttttgggagtgctatcatttagcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcccagttgagttcttcaacatttttctactttggttttgggagtgctatcatttagcta 324
Query: 125 ttactttttagctttatcccaatcctttacttgtccaaattcctatctacactctagctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttactttttagctttatcccaatcctttacttgtccaaattcctatctacactctagctt 384
Query: 185 aactcatgcatagccaattacacagcgtccttcgttcacatataagcttacatacagtat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aactcatgcatagccaattacacagcgtccttcgttcacatataagcttacatacagtat 444
Query: 245 ttgccgtttctaattcctagccccagtttattgtatttataccgataagcactgcaggtt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgccgtttctaattcctagccccagtttattgtatttataccgataagcactgcaggtt 504
Query: 305 agctcagtagtttccaagttttccacaataatacctcattttatgcatcaaatatttatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agctcagtagtttccaagttttccacaataatacctcattttatgcatcaaatatttatg 564
Query: 365 gagcacctaagttccagatattttgtttggtacaaatactcgtgtaaacagaaccctggc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagcacctaagttccagatattttgtttggtacaaatactcgtgtaaacagaaccctggc 624
Query: 425 cttgaagacagtcagtctcgctcgcagtctgatgatctaagtaaactttaagaggcatgg 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 625 cttgaagacagtcagtctcgctcgcagtctgatgatctaagtaaactttaagaggcttgg 684
Query: 485 tgggcaggcagtgaagataagacgcacataaacactttatagcactagaaagtgagaagc 544
||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 685 tgggcag----tgaagataagacgcacataaacactttatagcactagaaaatgagaagc 740
Query: 545 agaagcaagcac 556
||||||||||||
Sbjct: 741 agaagcaagcac 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 952
Length adjustment: 10
Effective length of query: 546
Effective length of database: 942
Effective search space: 514332
Effective search space used: 514332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_d24.g1 MSMg01no383_d24.g1 CHROMAT_FILE:
MSMg01no383_d24.g1 PHD_FILE: MSMg01no383_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:16 2005
(399 letters)
>mm_chr13_82093347_82094145
Length = 799
Score = 741 bits (383), Expect = 0.0
Identities = 395/399 (98%)
Strand = Plus / Minus
Query: 1 attaacctcttaactctggtacaagtccatattcacaagtgtgacaatgattaagttaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 attaacctcttaactctggtacaagtccatattcacaagtgtgacaatgattaagttaat 540
Query: 61 gagttaatcatttctttctagttacagcctttattaattagttgatttaaattgggagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gagttaatcatttctttctagttacagcctttattaattagttgatttaaattgggagtg 480
Query: 121 ggaggaggaagggaaggaaagttctgtagcgacaatgttcataatgccagatacaatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ggaggaggaagggaaggaaagttctgtagcgacaatgttcataatgccagatacaatttc 420
Query: 181 tgaagacttggattttttcagttgtatattgaaaatatagatatattttcgatattgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tgaagacttggattttttcagttgtatattgaaaatatagatatattttcgatattgtat 360
Query: 241 atatttttaatccatcaagttccactaagctgattagggtattgtagcaaaataaactgc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 atatttttaatccatcaagttccactaagctgattagggtattgtagcaaaataaactgt 300
Query: 301 ttggcatacactatgtgtcatttctattaacactgtaccttaagtggaatctacaaggac 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 299 ttggcatacactatgtgtcatttctattaacattgtaccttaagtggaatctacaaggac 240
Query: 361 tgtgacatggctctcacaggactgtgagcttgatgctcc 399
|||||||||| ||||||||||||||||||| ||||||||
Sbjct: 239 tgtgacatggttctcacaggactgtgagctcgatgctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
