Query= MSMg01no383_g21.b1 MSMg01no383_g21.b1 CHROMAT_FILE:
MSMg01no383_g21.b1 PHD_FILE: MSMg01no383_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:29 2005
(432 letters)
>mm_chr13_31876303_31877135
Length = 833
Score = 619 bits (320), Expect = 0.0
Identities = 381/430 (88%), Gaps = 45/430 (10%)
Strand = Plus / Plus
Query: 4 ggaattccacaggtgcgacagtggcctatggttaa-ggaaaaaaaaattactcccatggt 62
|||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||
Sbjct: 204 ggaattccacaggtgcgaaagtggcctatggttaaggggaaaaaaaattactcccatggt 263
Query: 63 gcctgcttccatcccggcatgattccctgtccctgcacgcagggagtcaaaaataaaaca 122
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcctgcttccatcccagcatgattccctgtccctgcacgcagggagtcaaaaataaaaca 323
Query: 123 ccccagcaacattgatctgatgccatcttttaaagaagaaagaaaagaagcgtgcgtcta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccccagcaacattgatctgatgccatcttttaaagaagaaagaaaagaagcgtgcgtcta 383
Query: 183 gacttagcctgaaaacacaagggtacggccaagtcagcatggttattaagtatacacact 242
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 gacttagcctgaaaacacaagggtacggccaagtcagcatggttactaagtatacacact 443
Query: 243 ggaaaatccataacacacacacacacacacacacacacacacacacacacacacacacac 302
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggaaaatccataacacacacacacacacacacacacacacaca----------------- 486
Query: 303 acacagagagagagagagagagagggagagagagagagagagcacataaagttcccaccc 362
|||||||||||||||||||||||||||||||||
Sbjct: 487 ---------------------------gagagagagagagagcacataaagttcccaccc 519
Query: 363 ccagcccccaggtgcagcatgcatattacatgacgtgatagctctgcagctctagagaga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ccagcccccaggtgcagcatgcatattacatgacgtgatagctctgcagctctagagaga 579
Query: 423 tacatttgta 432
||||||||||
Sbjct: 580 tacatttgta 589
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 833
Length adjustment: 9
Effective length of query: 423
Effective length of database: 824
Effective search space: 348552
Effective search space used: 348552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_g21.g1 MSMg01no383_g21.g1 CHROMAT_FILE:
MSMg01no383_g21.g1 PHD_FILE: MSMg01no383_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:29 2005
(423 letters)
>mm_chr13_32004884_32005706
Length = 823
Score = 690 bits (357), Expect = 0.0
Identities = 413/447 (92%), Gaps = 24/447 (5%)
Strand = Plus / Minus
Query: 1 tcctttctaagaattatttgaggatgaaaggagtcatttatagaatctgacaagcaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 448 tcctttctaagaattatttgaggatgaaaggagtcatttatagaatctgtcaagcaataa 389
Query: 61 atatctaataccatgcctacattcatttcttatttattcattccctaaaatttatgctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 388 atatctaataccatgcctacattcatttcttatttattcattccctaaagtttatgctgt 329
Query: 121 gcttttagaccctgataatgcaatggtaaataagactgacttgcccccaataaatgtagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gcttttagaccctgataatgcaatggtaaataagactgacttgcccccaataaatgtagt 269
Query: 181 agatgtgcagctgcggtcaatctctagaatccagacttgaagaaagtagactgtcacaac 240
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 268 agatgtgcagctgtggtcaatcactagaatccagacttgaagaaagtagactgtcacaac 209
Query: 241 ccaaaaact------------------------gtgtgtgtctgtgtgtctgtgtgtgta 276
||||||||| |||||||| ||||||| ||||||||||
Sbjct: 208 ccaaaaactctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgta 149
Query: 277 tactcatgtgtacatgtgtatctgttaagttatataaagtgtatatattttgtacttttt 336
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 148 tactcatgtgaacatgtgtatctgttaagttatataaagtgtatatattttgttcttttt 89
Query: 337 tggttttcattttttcttaacgttcagtagctgttcagtggtggagacatatcagagaaa 396
||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 88 tggttttcattttttcttaacattcagtagctgttcagtggtggagacatataagagaaa 29
Query: 397 tatgagtattgatattaacctaatact 423
|||||||||||||||||||||||||||
Sbjct: 28 tatgagtattgatattaacctaatact 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
