Query= MSMg01no383_h09.b1 MSMg01no383_h09.b1 CHROMAT_FILE:
MSMg01no383_h09.b1 PHD_FILE: MSMg01no383_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:31 2005
(502 letters)
>mm_chr13_41450201_41451101
Length = 901
Score = 934 bits (483), Expect = 0.0
Identities = 495/499 (99%), Gaps = 1/499 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagattcctgtagtccaattgaatgagagcaaagaaactcaaggaaaagagaaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ggaattcagattcctgtagtccaattgaatgagagcaaagaaactcaaggaaaagagaaa 642
Query: 64 gctacagtcaaaggcttctggagaggaacttagaaaatatttttattttccaaagctgtc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gctacagtcaaaggcttctggagaggaacttagaaaatatttttattttccaaagctgtc 582
Query: 124 ttaaaggagaagttatagcagacctttggtttagctgataatgaccatttataccccttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ttaaaggagaagttatagcagacctttggtttagctgataatgaccatttataccccttt 522
Query: 184 ttggtttgatgtataagctttaattttttttttctaaattgcttgttgtgttcaatggaa 243
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 521 ttggtttgatgtataagctttaa-tttttttttctaaattgcttgttgtgttcaatggaa 463
Query: 244 acttaggtccccttccaaccccaccagctttcaaaatggtgtgtgctgcctataaattta 303
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 462 acttaggtccccttccaaccccaccagctttcaaaatggtgtgtgctgcctgtaaattta 403
Query: 304 aaagcagacagaaggcgttttgaaaagcatagcttcattatttatggttttatatttacc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aaagcagacagaaggcgttttgaaaagcatagcttcattatttatggttttatatttacc 343
Query: 364 taggaaacccagtttaaagctaaaggactttacatgtccagagatgaggctttgtcaaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 taggaaacccagtttaaagctaaaggactttacatgtccagagatgaggctttgtcaaaa 283
Query: 424 ttgcaggtgtcttgataataacatgcttagcacgctgtacaacacacgctgaagccctca 483
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 282 ttgcaggtgtcttgataataacatgtttagcacgctgtacaacacaggctgaagccctca 223
Query: 484 gcaaccccttcttcttaga 502
|||||||||||||||||||
Sbjct: 222 gcaaccccttcttcttaga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 901
Length adjustment: 10
Effective length of query: 492
Effective length of database: 891
Effective search space: 438372
Effective search space used: 438372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_h09.g1 MSMg01no383_h09.g1 CHROMAT_FILE:
MSMg01no383_h09.g1 PHD_FILE: MSMg01no383_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:31 2005
(560 letters)
>mm_chr13_41325954_41326913
Length = 960
Score = 1044 bits (540), Expect = 0.0
Identities = 555/560 (99%)
Strand = Plus / Plus
Query: 1 agttaaaatatctaaagcagtagaagatatcttccagacaattgcccctcggtctggagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttaaaatatctaaagcagtagaagatatcttccagacaattgcccctcggtctggagc 260
Query: 61 caacagagctgagttcccctctagtgacatgccagggagttaagagattgtgttggttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caacagagctgagttcccctctagtgacatgccagggagttaagagattgtgttggttaa 320
Query: 121 tttccattgtcagtttggctggacttagggtcacttaggagaccagtggggcacatctct 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 tttccattgtcagtttggctggacttagggtcacttaggagactagtggggcacatctct 380
Query: 181 ggtcatttataaggtcgtttcctaagagggctaactaaaagaagattcaccctgaagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtcatttataaggtcgtttcctaagagggctaactaaaagaagattcaccctgaagggt 440
Query: 241 accatcccatgggccagagtcctagagaggagggagaaggagacagacagcagaatgtag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accatcccatgggccagagtcctagagaggagggagaaggagacagacagcagaatgtag 500
Query: 301 gcatccccactctgtttcctgacctccatgctaattcttcagataacagaactgaacact 360
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 501 gcatccccactctgtttcctgacctccatgctaactcttcagataacaggactgaacact 560
Query: 361 ctcaagccaagagctaaaataaagctctttggccaggcatttccatcataactatgagaa 420
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 561 ctcaagccaagagctaaaataaagctctttggccagccattttcatcataactatgagaa 620
Query: 421 aaaggaactaatgcagacagaaaaattttaaaacaatatgggattagttttactgtttaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaggaactaatgcagacagaaaaattttaaaacaatatgggattagttttactgtttaa 680
Query: 481 catttattcacggttattccatatctagaagtcgaacatgtagactagcaatagtaattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catttattcacggttattccatatctagaagtcgaacatgtagactagcaatagtaattt 740
Query: 541 ttcaacgtgcatttggttaa 560
||||||||||||||||||||
Sbjct: 741 ttcaacgtgcatttggttaa 760
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space: 522500
Effective search space used: 522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
