Query= MSMg01no383_l07.b1 MSMg01no383_l07.b1 CHROMAT_FILE:
MSMg01no383_l07.b1 PHD_FILE: MSMg01no383_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:49 2005
(473 letters)
>mm_chr13_81885831_81886703
Length = 873
Score = 880 bits (455), Expect = 0.0
Identities = 465/469 (99%), Gaps = 2/469 (0%)
Strand = Plus / Plus
Query: 5 gaattcacctgtattctgccacgctggcttggtggtaatggatttctttaacttgtttag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacctgtattctgccacgctggcttggtggtaatggatttctttaacttgtttag 264
Query: 65 gtctcagaatacccttatctgctgattttaaaagataacattacgggggctggaaagatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtctcagaatacccttatctgctgattttaaaagataacattacgggggctggaaagatg 324
Query: 125 gcttagtggttaagagcactgactgcccttccgaaggtcctgagttctattcccagcaac 184
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 325 gcttagtggttaagagcactgactgcccttccgaaggtcctgagttcaattcccagcaac 384
Query: 185 cacatggtggctcacaaccatctgtaatgagatctgactccctcttctggagtgtttgaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cacatggtggctcacaaccatctgtaatgagatctgactccctcttctggagtgtttgaa 444
Query: 245 gatagctacagtgtaatcctataataaataattaaatcttaaaaaaaaaaaaactttaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 445 gatagctacagtgtaatcctataataaataattaaatcttaaaaaaaaaaa--ctttaaa 502
Query: 305 agataaccttactttatatctttgttagacatcatttaacctcagggcttgaaatacatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agataaccttactttatatctttgttagacatcatttaacctcagggcttgaaatacatc 562
Query: 365 attcatgctctcatgacacttagttcttttgagtgctctgatgttatttatacatgtttg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 attcatgctctcatgacacttagttcttttgagtgctctgatgttatttatacatgtttg 622
Query: 425 cttttgtatgtcagctgacatctttctcttacatccctaatattgttcc 473
|||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 623 cttttgtatgtcagttgacatctttctcttacatccctaatattgttcc 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_l07.g1 MSMg01no383_l07.g1 CHROMAT_FILE:
MSMg01no383_l07.g1 PHD_FILE: MSMg01no383_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:49 2005
(489 letters)
>mm_chr13_82050188_82051076
Length = 889
Score = 654 bits (338), Expect = 0.0
Identities = 345/348 (99%), Gaps = 2/348 (0%)
Strand = Plus / Minus
Query: 1 ataaaatggaagacaattctcccacgttgtcctcccatcatcctccctcttccaacaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 ataaaatggaagacaattctcccacgttgtcctcccatcatcctccctcttccaacaagt 289
Query: 61 agatatgcatacatgcatacacaggggtggtggtggtggtggagggagaacaaatgttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 agatatgcatacatgcatacacaggggtggtggtggtggtggagggagaacaaatgttaa 229
Query: 121 aaaccccaacaaaaccagaaagattaaaagagaacatgaaattagtatattgatgagaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 aaaccccaacaaaaccagaaagattaaaagagaacatgaaattagtatattgatgagaca 169
Query: 181 tctgcacttccatgttaaaaaaaaa--gaaaaagaaaaagaaaagagaacaaaagaaata 238
||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 168 tctgcacttccatgttaaaaaaaaaaagaaaaagaaaaagaaaagagaacaagagaaata 109
Query: 239 atgctcctaggaacactcaggcacaagtttctgggtgagtccctacttccatatcacaag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 atgctcctaggaacactcaggcacaagtttctgggtgagtccctacttccatatcacaag 49
Query: 299 taattcaaaggatagaatggttaggtcttttgtcaactctgtgcttaa 346
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 taattcaaaggatagaatggttaggtcttttgtcaactctgtgcttaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space: 421041
Effective search space used: 421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
