XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATTATT
ATGCACTTCACTGAGGATTCAGTTATTGCAAGGGTAAGTTCAGGGAAAGT
GGCCCAAACAAACTCACTGAATTAGCATAATATTTAAAAAGAGATACCCT
AAAAATGTCAGTGTCATAAAGATTTAAGATGTCACATTTCTGTGACGTGT
TAAATCACAAAAGGAAGAAAAGAATAAATCTAGCTTCTTTACCCATTCAT
ATACCTTTCAGCAATACAAAGGTAGTAAAACATGTCTAAAAATACATTAA
TATTAAAAGTGACTAATACAAAATGTCACTGCCCATTCTGATAAAGATAT
CATTGCAAAGCTAATCTGGAATGGTTGAACCTACAATCTGGATTTATCAA
GCATTTTAATATTGTATTAATCTTTTGTAAACACCAAGTCTAAATGCTGG
GGACAATTTTATTTTAAAAAGTCATATTTGGCTTTTGATAATAATTATAA
TATTTGGTAATTTGGCTTCTAAAAGTACCACAGGGATACTGGCATGAGGA
AGCTTTTGGGGCCCTTCCTTCTTCCTGATCACACAATTATGGCAATTCCC
TTTCCATATGTCATGGTCACATGCCAGGACATGAGCACATCACAAGGCAG
GCAATGATGAATGATTTGTCCCATCCTCTAAAAAAAAACAGACAAAATTC
TCCCTATGCTCCAGTCAACAAAAACTGCTGATATTGTCTTTTGTCCCC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCTGTCAAGGTCTCCGTTTATTAGGCTGAAACGCTGGGCTT
TAAAGCATACATCAAGGGGAATAGGTAGTGGTTGAGGGGGAATTAACAAA
GAACAAAGAAGTGATCATCAGAAGACATGAGGGCCGAAGTCAGGCTCCAG
GAGGCGGGCACTCTTTGCCTTATCTCCGGAATTCGGATCTTCCTTAACAG
CCTTGGGTGTCAGGCCGGGCTCAGCACATAACTCATGTCCTTGGATGTCA
TGGGAGTCAGGAAAAGATAAGGAAGAGGGGACCATAATTCAGCTTTTACC
GCCTCAGGTGCCAGGAAGGGAACAGGGAGAAGGGAGTGACAACCTGCTCC
TTAGCACAAGGCCATTTGGCTTGCCAGAATGGGAGACTGTGAAAGGCTCG
CTTTCTCAAGGTATGGTCTCCAACAGGGATGAACTTGAAAGGGCTAATAG
AAATAGAAATTGGTAGTTTGGGAACTCAGTACCTCATAAGTATTCCACAC
ATCCAACACAAGAATCTTANAAAGCAGAGGAAGGAAGGAAGGAAGGAAGG
AAGGAAGGAAGGAAGGAATGAAAGAATGTAAGGACGTTTTCACCCTCTTT
GCTTTTTTTAATCCATTTTTTTTATGTTTTTGTAATTGTCATTCTAAATT
TTTTTTCTTATTAATTCATTATCATCGTTCTATCTTTTCATTCATN

Query= MSMg01no384_m13.b1 MSMg01no384_m13.b1 CHROMAT_FILE:
MSMg01no384_m13.b1 PHD_FILE: MSMg01no384_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:09 2005
         (556 letters)



>mm_chr13_106817031_106817985
          Length = 955

 Score =  961 bits (497), Expect = 0.0
 Identities = 542/557 (97%), Gaps = 3/557 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   actgaggattcagttattgcaagggtaagttcagggaaagtggcccaaacaaactcactg 60
           ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 actgaggattcagttattgaaagggtaagtttagggaaagtggcccaaacaaactcactg 260

                                                                       
Query: 61  aattagcataatatttaaaaagagataccctaaaaatgtcagtgtcataaagatttaaga 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 aattagcataatatttaaaaagagatgccctaaaaatgtcagtgtcataaagatttaaga 320

                                                                       
Query: 121 tgtcacatttctgtgacgtgttaaatcacaaaaggaagaaaagaataaatctagcttctt 180
           ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 tgtcacatttctgtgacgttttaaatcacaaaaggaacaaaagaataaatctagcttctt 380

                                                                       
Query: 181 tacccattcatatacctttcagcaatacaaaggtagtaaaacatgtctaaaaatacatta 240
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacccattcatatacctttcaacaatacaaaggtagtaaaacatgtctaaaaatacatta 440

                                                                       
Query: 241 atattaaaagtgactaatacaaaatgtcactgcccattctgataaagatatcattgcaaa 300
           ||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 441 atattaaaagtgactaatacaaaatgtcactgcccatcctgataaagatat-agtgcaaa 499

                                                                       
Query: 301 gctaatctggaatggttgaacctacaatctggatttatcaagcattttaatattgtatta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gctaatctggaatggttgaacctacaatctggatttatcaagcattttaatattgtatta 559

                                                                       
Query: 361 atcttttgtaaacaccaagtctaaatgctggggacaattttattttaaaaagtcatattt 420
           |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 560 atcttttgtaaacaccaagtctaagttctggggacaattttattttaaaaagtcatattt 619

                                                                       
Query: 421 ggcttttgataataattataatatttggtaatttggcttctaaaagtaccacagggatac 480
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggcttttgataataattttaatatttggtaatttggcttctaaaagtaccacagggatac 679

                                                                       
Query: 481 tggcatgaggaagcttttggggcccttccttcttcctgatcacacaattatggcaattcc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 680 tggcatgaggaagcttttggggcccttccttcttcctgatcacacaattatggcaat-cc 738

                            
Query: 541 c-tttccatatgtcatg 556
           | ||| |||||||||||
Sbjct: 739 cgttttcatatgtcatg 755


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 955
Length adjustment: 10
Effective length of query: 546
Effective length of database: 945
Effective search space:   515970
Effective search space used:   515970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)