Query= MSMg01no385_f10.b1 MSMg01no385_f10.b1 CHROMAT_FILE:
MSMg01no385_f10.b1 PHD_FILE: MSMg01no385_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:53 2005
(578 letters)
>mm_chr13_81868068_81869045
Length = 978
Score = 1027 bits (531), Expect = 0.0
Identities = 563/574 (98%)
Strand = Plus / Minus
Query: 5 gaattccagcaggtttcaggaaggaaacaaaccgcatgtctgttcacctttttctggtac 64
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 778 gaattccagcaggtttcaggaaggaaacaaactgcatgtctgttcacctttttctggtac 719
Query: 65 ttgcagtttttgtttttaattttcataaatgacagtgtctatctgaaactgctcctctcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ttgcagtttttgtttttaattttcataaatgacagtgtctatctgaaactgctcctctcc 659
Query: 125 tgacataatttatcagggcaacattagggaaactgtttatagaatgaggacaaagggaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tgacataatttatcagggcaacattagggaaactgtttatagaatgaggacaaagggaaa 599
Query: 185 aatcacttgaaaatgaatcagcagaatactgtgaaaaatagacaaagtgatatgttctag 244
||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 aatcacttgaacttgaaccagcagaatactgtgaaaaatagacaaagtgatatgttctag 539
Query: 245 ttcaaaaggcctggactgtatctcaggtctactactttcatctgcagacagatgctgttt 304
||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||
Sbjct: 538 ttcaaaaggcctggactgtatctaaggtctactactttcatctgcagaaagttgctgttt 479
Query: 305 cactatagtacatgcattgttttccatcgaggtaatgcactcgatgagactgctaacctc 364
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 478 cactatagtacatgcattgttttccatcgaggtaatgcactcgaggagactgctaacctc 419
Query: 365 tttgaccttcaattagaggcagcttttaggttagagataacagtgtagatttatgctttg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tttgaccttcaattagaggcagcttttaggttagagataacagtgtagatttatgctttg 359
Query: 425 ccttgacagcaaatcatctattcacttaatgaaatgtagtgcctttgccttcgtgtctcc 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 358 ccttgacagcaaatcatctattcacttaatgaaatgtagtgcctttgccttcgtgtcttc 299
Query: 485 taaccaaagctattctattacagctgcataggagtgtgtgtgtgtgcaaattgtanatga 544
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 298 taaccaaagctattctattacagctgcataggagtgtgtgtgtgtgcagattgtaaatga 239
Query: 545 atttttaatatctatctcttacatctccttccag 578
||||||||||||||||||||||||||||||||||
Sbjct: 238 atttttaatatctatctcttacatctccttccag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_f10.g1 MSMg01no385_f10.g1 CHROMAT_FILE:
MSMg01no385_f10.g1 PHD_FILE: MSMg01no385_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:53 2005
(605 letters)
>mm_chr13_81808876_81809880
Length = 1005
Score = 1108 bits (573), Expect = 0.0
Identities = 594/605 (98%), Gaps = 7/605 (1%)
Strand = Plus / Plus
Query: 1 taacttagaagacgctgtcgtttttcttactcaagattagttatgtttaaattttaactt 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taacttagaagacgctgtcatttttcttactcaagattagttatgtttaaattttaactt 260
Query: 61 ttaaaagattaccttttagtttgttgttcatgtcaaggattccaaatgcttacaactgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaaagattaccttttagtttgttgttcatgtcaaggattccaaatgcttacaactgaa 320
Query: 121 gaaaatttgataccatacctaccaccaaaatattaattgtaaaagttttaattctaaaat 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 gaaaatttgataccatacctaccaccaaaatattaattataaaagttttaattctaaaat 380
Query: 181 tattcctgacaccaagtacttaacacttaaatctgaaactttaaaaatatgtttagcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattcctgacaccaagtacttaacacttaaatctgaaactttaaaaatatgtttagcata 440
Query: 241 ttttttttgtgccatgaaagcaaatgtagaaacagatatggaaacatagtttataatttg 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 t-------gtgccatgaaagcaaatgtagaaacagatatggaaacatagtttataatttg 493
Query: 301 cataatacaggctaagaaatagatatcttaagaccccccaaatagtgtcattgggttgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cataatacaggctaagaaatagatatcttaagaccccccaaatagtgtcattgggttgga 553
Query: 361 aacttcccatttgatcacacggacactgtaatgcgtcaagatctattccttaaaaaaagg 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 554 aacttcccatttgatcacacggacactgtaattcgtcaagatctattccttaaaaaaagg 613
Query: 421 aatcctttatgactagctctgcaacctcacctccacttcttcatttttaaaaatacttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aatcctttatgactagctctgcaacctcacctccacttcttcatttttaaaaatacttgt 673
Query: 481 gtctgatatttgaaggcacttttgtagttctttgatgaagtgttatacagaaaagtatat 540
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 674 gtctgatatttgaaggcacttttgtagttctttgatgaagtgttacacagaaaagtatat 733
Query: 541 tcagcaaatccctctttatatactcaacatacttattgctgttataaatagtaacttatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tcagcaaatccctctttatatactcaacatacttattgctgttataaatagtaacttatg 793
Query: 601 cctta 605
|||||
Sbjct: 794 cctta 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space: 592025
Effective search space used: 592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
