Query= MSMg01no386_g16.b1 MSMg01no386_g16.b1 CHROMAT_FILE:
MSMg01no386_g16.b1 PHD_FILE: MSMg01no386_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:13 2005
(673 letters)
>mm_chr13_93681559_93682631
Length = 1073
Score = 1237 bits (640), Expect = 0.0
Identities = 661/668 (98%)
Strand = Plus / Minus
Query: 6 gaattctcaatgtggtgttcaatcaaccctcagcagcgctgagacgctgggacggggaga 65
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 873 gaattctcaatgtggtgttaaatcaaccctcagcagcactgagacgctgggacggggaga 814
Query: 66 ggattgtttgtttgtttgtttgcttttctgactgacataagcccccagataatctataaa 125
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 813 gggttgtttgtttgtttgtttgcttttctgactgacataagcccccagatgatctataaa 754
Query: 126 ggaaacgaggagtctaaatccccagcactgctttccacacacccagcaaatccaaggacc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ggaaacgaggagtctaaatccccagcactgctttccacacacccagcaaatccaaggacc 694
Query: 186 ccacctgcgactcctccttgctggagccttccccagcttatacgtgtagactcagtaatg 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 ccacctgcgactcctccttgctggagccttccccagcttatacgtgtagactcagtaatg 634
Query: 246 tgtgtgcatgtatgctgggggtggatttagcagttcccttacttttcaatgatgggattg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tgtgtgcatgtatgctgggggtggatttagcagttcccttacttttcaatgatgggattg 574
Query: 306 ttcatgtttcaacacctgcaaatacttgagagagccttaatctagtccaaagatctcagc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ttcatgtttcaacacctgcaaatacttgagagagccttaatctagtccaaagatctcagc 514
Query: 366 caggagtccttccagctctgtgccgccctttgctaatcagagctagacttcagttaatcc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 caggagtccttccagctctgtgccgccctttgctaatcagagctagacttcagttaatcc 454
Query: 426 ctccagaggtccaattattttgcgtgtgcagtggctctccgggaattatgacaacgctga 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ctccagaggtccaattattttgcgtgtgcagtggctctccgggaattatgacaacgctga 394
Query: 486 gcagacccagcagaagcgtagagctgatacataagaagtcatctgctttgcagctcagag 545
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 393 gcagacccagcagaagcgtagagctgatacataagaagtcgtctgctttgcagctcagag 334
Query: 546 aagcaattttggctaagccgttcttgcctttacacgggtttacatgctttaaaatccgaa 605
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 333 aagcaattttggctaagccgttcttgcctttacacgggtttacatgctttagaatccgaa 274
Query: 606 tgtgggaggaccaggatggaggagggtttgctaatgtcttaaagtacttggtgggagcac 665
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 273 tgtgggaggaccaggatggaggagggtttgctaatgtcttagagtacttggtgggagcac 214
Query: 666 tgatctgc 673
||||||||
Sbjct: 213 tgatctgc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_g16.g1 MSMg01no386_g16.g1 CHROMAT_FILE:
MSMg01no386_g16.g1 PHD_FILE: MSMg01no386_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:13 2005
(609 letters)
>mm_chr13_93520450_93521458
Length = 1009
Score = 1064 bits (550), Expect = 0.0
Identities = 595/610 (97%), Gaps = 2/610 (0%)
Strand = Plus / Plus
Query: 1 aatacctagcaggacacgaaaccaggtatgatgcatacctttaagcctggtatgaagaag 60
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 201 aatacctagcaggacacgaaaccaggtatgatgcatacctttaaacctagtatgaagaag 260
Query: 61 t-ggaggcaggaggaccagaagctcacggtgatctttggtcacacagagagtttgggacc 119
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcgg-ggcaggaggaccagaagctcacggtgatctttggtcacacagagagtttgggacc 319
Query: 120 agtctggtttatatgagaacccatctaaaaccataaaataataataaaataaattgccaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agtctggtttatatgagaacccatctaaaaccataaaataataataaaataaattgccaa 379
Query: 180 acttctttagaattaaatctcaaggggatttataaaatttctgggtatcttgactgacta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 380 acttctttagaattaaatctcaaggggatttataaaatttctgggtatcttgattgacta 439
Query: 240 ctggaaagtattgttttttacacagctgcagaaagcttctgccctgtacacatggtgact 299
||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctggaaagtatcggctagtacacagctgcagaaagcttctgccctgtacacatggtgact 499
Query: 300 ggctctactgtcattgtcaccagaccctacatcccactgtttttgttacctcaaaggcag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggctctactgtcattgtcaccagaccctacatcccactgtttttgttacctcaaaggcag 559
Query: 360 ccactctcccttcactgcccagcgaatgcttactggctgtttgcttcctgcctggtactg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ccactctcccttcactgcccagcgaatgcttactggctgtttgcttcctgcctggtactg 619
Query: 420 tgggatctgaatacagtgacagacatagaatgacaagatctgtttttttccatttgactc 479
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 620 tgggatctgaatacagtgacagacatagaatgacaagatctgttttcttccatttgactc 679
Query: 480 acaggacgctagggggagccaaatccgtaagtgtctgtggaaggaggtgacagaaaggct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acaggacgctagggggagccaaatccgtaagtgtctgtggaaggaggtgacagaaaggct 739
Query: 540 gaggaaaggatgtcagaagaacaaggcaagtttagttcaggtttctcaggatgccacctc 599
|||| |||| |||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 740 gagggaagggtgtcagaagaacaaggcaagcttagttcaggtttctcaggatgtcacctc 799
Query: 600 ctcccgaagc 609
||||||||||
Sbjct: 800 ctcccgaagc 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
