Query= MSMg01no387_c07.b1 MSMg01no387_c07.b1 CHROMAT_FILE:
MSMg01no387_c07.b1 PHD_FILE: MSMg01no387_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:06 2005
(422 letters)
>mm_chr13_63218121_63218943
Length = 823
Score = 804 bits (416), Expect = 0.0
Identities = 419/420 (99%), Gaps = 1/420 (0%)
Strand = Plus / Plus
Query: 4 ggaattctta-atcataaacatttctgttggcgggtgtggatggagtagcagtgacagtg 62
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttacatcataaacatttctgttggcgggtgtggatggagtagcagtgacagtg 263
Query: 63 gcaggactgtgattcactgatcccctctgccacacagacacaccgccatcctaccagatg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcaggactgtgattcactgatcccctctgccacacagacacaccgccatcctaccagatg 323
Query: 123 ccaccaaaaactcagcagtaataacaacaaagcaacctacactccaggtgactgtgggtc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccaccaaaaactcagcagtaataacaacaaagcaacctacactccaggtgactgtgggtc 383
Query: 183 catacagggaagctctcgactgccttccccagctgccttcccctccctgcccctctcctc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 catacagggaagctctcgactgccttccccagctgccttcccctccctgcccctctcctc 443
Query: 243 agttaccccatttattgttggatatcattcatatctgtgactttactttctaagtttatt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agttaccccatttattgttggatatcattcatatctgtgactttactttctaagtttatt 503
Query: 303 ctttatcttaatgcttctaaaacatcatgtgagactgacggtgtggctcatggtaaagtg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctttatcttaatgcttctaaaacatcatgtgagactgacggtgtggctcatggtaaagtg 563
Query: 363 attggtagcctggcccaggtttgggataccatccacattacaacatacacacacacacac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attggtagcctggcccaggtttgggataccatccacattacaacatacacacacacacac 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 823
Length adjustment: 9
Effective length of query: 413
Effective length of database: 814
Effective search space: 336182
Effective search space used: 336182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_c07.g1 MSMg01no387_c07.g1 CHROMAT_FILE:
MSMg01no387_c07.g1 PHD_FILE: MSMg01no387_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:06 2005
(423 letters)
>mm_chr13_63388086_63388908
Length = 823
Score = 727 bits (376), Expect = 0.0
Identities = 385/388 (99%)
Strand = Plus / Minus
Query: 1 tatgaaccacaagtaaaaagggctgtcccaagcaaaagacaacacatacccagtggctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tatgaaccacaagtaaaaagggctgtcccaagcaaaagacaacacatacccagtggctaa 329
Query: 61 gttttccctctttctgctttagtttggggtggaagggagggaaacagagctgaagagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gttttccctctttctgctttagtttggggtggaagggagggaaacagagctgaagagaca 269
Query: 121 gcatactctatcagctaagaaagagccttcccatgaacaaaaaccacattaaccaacggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gcatactctatcagctaagaaagagccttcccatgaacaaaaaccacattaaccaacggt 209
Query: 181 catgctcagctgggttatacatcagtggtcaagcatgtgcctgacatgcgcaaagcccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 catgctcagctgggttatacatcagtggtcaagcatgtgcctgacatgcgcaaagcccta 149
Query: 241 gattccacccctggccagacagcccagaaacaaccggatgaacctaaccatgggttgttc 300
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 148 gattccacccctggccagacagcccagaaacaaccggatgaacttaactgtgggttgttc 89
Query: 301 acgtgttcttcatagtcttgcatggttcctcatcttaccttgttaacaattctgtgaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 acgtgttcttcatagtcttgcatggttcctcatcttaccttgttaacaattctgtgaaga 29
Query: 361 aagtatttatggattcattttaatcccc 388
||||||||||||||||||||||||||||
Sbjct: 28 aagtatttatggattcattttaatcccc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
